RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 ZNF441Q8N8Z8 693 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 TC2NQ8N9U0 490 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 C1orf162Q8NEQ5 155 aaPredicted RBP3.32□□□□□ -1.88
RBM39-220ENST00000455343 TRPV3Q8NET8 790 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 OR56A3Q8NH54 315 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 OR14A16Q8NHC5 309 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 SLC2A12Q8TD20 617 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 ZNF721Q8TF20 911 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 TMEM171Q8WVE6 324 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CTHRC1Q96CG8 243 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 STARD4Q96DR4 205 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 SPACA9Q96E40 222 aaPredicted RBP3.32□□□□□ -1.88
RBM39-220ENST00000455343 SNF8Q96H20 258 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CCDC42Q96M95 316 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 TRIB1Q96RU8 372 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 TMEM204Q9BSN7 226 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 HAUS8Q9BT25 410 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 ANP32EQ9BTT0 268 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 DOHHQ9BU89 302 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 KIFC1Q9BW19 673 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 PLA2G12AQ9BZM1 189 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 NAT10Q9H0A0 1025 aaKnown RBP3.32□□□□□ -1.88
RBM39-220ENST00000455343 KLHL31Q9H511 634 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CXorf56Q9H5V9 222 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 NHEJ1Q9H9Q4 299 aaPredicted RBP3.32□□□□□ -1.88
RBM39-220ENST00000455343 PRTFDC1Q9NRG1 225 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 YAE1D1Q9NRH1 226 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 ABCF3Q9NUQ8 709 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 KLHL28Q9NXS3 571 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 PSD3Q9NYI0 1048 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 WWOXQ9NZC7 414 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CNIH4Q9P003 139 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CLCF1Q9UBD9 225 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 DAPP1Q9UN19 280 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 PDE10AQ9Y233 779 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CRYL1Q9Y2S2 319 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 SLC6A5Q9Y345 797 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 DHRS7Q9Y394 339 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 CLCA3PQ9Y6N3 262 aa3.32□□□□□ -1.88
RBM39-220ENST00000455343 ABCA1O95477 2261 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 A0A1W2PNV4 684 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 MACROD2A1Z1Q3 448 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 LRIT2A6NDA9 550 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 C17orf105B2RV13 164 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GOLGA8KD6RF30 607 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 E5RI56 91 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GOLGA8TH3BQL2 631 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 PFDN6O15212 129 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 HCRTR2O43614 444 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GPRIN2O60269 458 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 SNX4O95219 450 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 VAPBO95292 243 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ACTL6AO96019 429 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CGAP01215 116 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CRHP06850 196 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 DANCRP0C864 163 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 EGR1P18146 543 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CHMP24386 653 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GDF1P27539 372 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 SERPINB3P29508 390 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 IDUAP35475 653 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 UGT2B10P36537 528 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 FDFT1P37268 417 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CD79BP40259 229 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 HNF4AP41235 474 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 DIO3P55073 304 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 LIM2P55344 173 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 RWDD2BP57060 319 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 BTN3A2P78410 334 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CRADDP78560 199 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 IGLV3-21P80748 117 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 CCZ1BP86790 482 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 CCZ1P86791 482 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 REEP5Q00765 189 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 TIAL1Q01085 375 aaKnown RBP eCLIP3.31□□□□□ -1.881e-6■■■□□ 16.2
RBM39-220ENST00000455343 FUT7Q11130 342 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 SLC13A2Q13183 592 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GAB1Q13480 694 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 VEZF1Q14119 521 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 SERTAD2Q14140 314 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 RCAN2Q14206 197 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 EFTUD2Q15029 972 aaKnown RBP eCLIP3.31□□□□□ -1.881e-13■■■□□ 16.8
RBM39-220ENST00000455343 PHKG1Q16816 387 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 FAM153CQ494X1 144 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 EIPR1Q53HC9 387 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 C6orf52Q5T4I8 152 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 UBAP2Q5T6F2 1119 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 ARMC3Q5W041 872 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 DUPD1Q68J44 220 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ADAM5Q6NVV9 412 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 NEPROQ6NW34 567 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 TMEM81Q6P7N7 255 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 PGM2L1Q6PCE3 622 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 PPP1R21Q6ZMI0 780 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 ZNF704Q6ZNC4 412 aaPredicted RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 MBOAT1Q6ZNC8 495 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 PIWIL4Q7Z3Z4 852 aaKnown RBP3.31□□□□□ -1.88
RBM39-220ENST00000455343 KIAA1328Q86T90 577 aa3.31□□□□□ -1.88
RBM39-220ENST00000455343 GPATCH11Q8N954 259 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms