RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 NT5EP21589 574 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 SSTR4P31391 388 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 CPOXP36551 454 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 MAN2A2P49641 1150 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 DGKQP52824 942 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 FOXO1Q12778 655 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 TRMT5Q32P41 509 aaKnown RBP16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 ZNF585AQ6P3V2 769 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 ASRGL1Q7L266 308 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 RETREG3Q86VR2 466 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 OR7A2PQ8NGA2 310 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 OR10G3Q8NGC4 313 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 JSRP1Q96MG2 331 aaPredicted RBP16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 OR52E6Q96RD3 313 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 DUSP26Q9BV47 211 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 CXorf21Q9HAI6 301 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 PNPLA3Q9NST1 481 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 TAS2R1Q9NYW7 299 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 CNIH4Q9P003 139 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 ACAD8Q9UKU7 415 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 LIPGQ9Y5X9 500 aa16.54■□□□□ 0.24
SQSTM1-204ENST00000453046 DNAJC13O75165 2243 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 A0A1W2PS29 197 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 C1orf226A1L170 272 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 FIGNL2A6NMB9 653 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 TP53I11O14683 189 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 GYG2O15488 501 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 DNAJC8O75937 253 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 NPPAP01160 153 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 PORP16435 677 aaPredicted RBP16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 CHRNB4P30926 498 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 PMPCAQ10713 525 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 HYAL4Q2M3T9 481 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 PGS1Q32NB8 556 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 EMC4Q5J8M3 183 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 ANXA8L1Q5VT79 327 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 LYPD8Q6UX82 237 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 RINLQ6ZS11 566 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 TRILQ7L0X0 811 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 PGAM4Q8N0Y7 254 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 RPRMLQ8N4K4 120 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 MARVELD2Q8N4S9 558 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 SARAFQ96BY9 339 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 DOHHQ9BU89 302 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 OR10A5Q9H207 317 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 SH2D2AQ9NP31 389 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 ZFP64Q9NPA5 681 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 GID8Q9NWU2 228 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 TNFRSF10DQ9UBN6 386 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 RNF6Q9Y252 685 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 PCDHA9Q9Y5H5 950 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 APCP25054 2843 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 CSMD1Q96PZ7 3565 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 CACNA1CQ13936 2221 aa16.53■□□□□ 0.24
SQSTM1-204ENST00000453046 EML6Q6ZMW3 1958 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 TRGV5A0A0B4J1U4 118 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 A0A1B0GVC2 190 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 RNASET2O00584 256 aaKnown RBP16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 AQP7O14520 342 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 SUSD5O60279 629 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 ERAL1O75616 437 aaKnown RBP16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 CLPSP04118 112 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 CELA3AP09093 270 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 CT62P0C5K7 136 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 LAMP1P11279 417 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 CPMP14384 443 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 TMED10P49755 219 aaKnown RBP16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 WNT3P56703 355 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 NRG3P56975 720 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 NFYCQ13952 458 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 NTRK2Q16620 822 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 ZNF385BQ569K4 471 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 WLSQ5T9L3 541 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 OR4F3Q6IEY1 312 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 SLC48A1Q6P1K1 146 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 SLC2A7Q6PXP3 512 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 DHDDSQ86SQ9 333 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 VPS37AQ8NEZ2 397 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 OR10Q1Q8NGQ4 319 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 FBXO27Q8NI29 283 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 DIO2Q92813 273 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 TP53INP1Q96A56 240 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 ITCHQ96J02 903 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 ALKBH4Q9NXW9 302 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 TAS2R7Q9NYW3 318 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 SH3BP4Q9P0V3 963 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 B4GALT7Q9UBV7 327 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 PSME2Q9UL46 239 aa16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 CHCHD2Q9Y6H1 151 aaPredicted RBP16.52■□□□□ 0.24
SQSTM1-204ENST00000453046 C15orf38-AP3S2A0A0A6YYH1 394 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 CFAP73A6NFT4 308 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 FAM90A27PA6NNH2 459 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 FXYD1O00168 92 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 HCN1O60741 890 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 KCNH1O95259 989 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 ACVR2AP27037 513 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 ALDH9A1P49189 494 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 NUP107P57740 925 aa16.51■□□□□ 0.23
SQSTM1-204ENST00000453046 PHC1P78364 1004 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms