RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TIA1P31483 386 aaKnown RBP eCLIP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 HSD17B3P37058 310 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 CD79BP40259 229 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 RFX3P48380 749 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 KCNJ5P48544 419 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 PNLIPRP2P54317 469 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 DSCR4P56555 118 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ETF1P62495 437 aaKnown RBP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 EEF1A1P68104 462 aaKnown RBP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 BTKQ06187 659 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 CKAP4Q07065 602 aaKnown RBP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ACSM2AQ08AH3 577 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 EEF1A1P5Q5VTE0 462 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ACSM2BQ68CK6 577 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 OR2A2Q6IF42 318 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 PPP4R4Q6NUP7 873 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF474Q6S9Z5 364 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 GPRIN3Q6ZVF9 776 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 BTLAQ7Z6A9 289 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 MEIOBQ8N635 442 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 C16orf78Q8WTQ4 265 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 DCAKDQ8WVC6 231 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 RNF138Q8WVD3 245 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ERP27Q96DN0 273 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 PGM2Q96G03 612 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 APIPQ96GX9 242 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF845Q96IR2 970 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-210ENST00000453030 COX4I2Q96KJ9 171 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF382Q96SR6 550 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 C1QTNF3Q9BXJ4 246 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 DSN1Q9H410 356 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 SLC35C2Q9NQQ7 365 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 FLRT3Q9NZU0 649 aa10.54□□□□□ -0.72
GARNL3-210ENST00000453030 GMFGO60234 142 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 COQ9O75208 318 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 JUNP05412 331 aaKnown RBP10.53□□□□□ -0.72
GARNL3-210ENST00000453030 CRHP06850 196 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 PEPDP12955 493 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 CRYGSP22914 178 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 PCSK6P29122 969 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 UGT2B10P36537 528 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 MC3RP41968 323 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 KIR2DL2P43627 348 aaPredicted RBP10.53□□□□□ -0.72
GARNL3-210ENST00000453030 CLDN15P56746 228 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 MRPS22P82650 360 aaKnown RBP10.53□□□□□ -0.72
GARNL3-210ENST00000453030 HEPACAMQ14CZ8 416 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 BCL2A1Q16548 175 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 UNC50Q53HI1 259 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 SPIN4Q56A73 249 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 ZNF678Q5SXM1 525 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 TMEM107Q6UX40 140 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 YTHDF3Q7Z739 585 aaKnown RBP10.53□□□□□ -0.72
GARNL3-210ENST00000453030 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
GARNL3-210ENST00000453030 TMEM151AQ8N4L1 468 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 FADS6Q8N9I5 356 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 OR2M3Q8NG83 312 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 FNDC9Q8TBE3 224 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 METTL6Q8TCB7 284 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 NUDT8Q8WV74 236 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 PIGTQ969N2 578 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 ARSGQ96EG1 525 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 BBS4Q96RK4 519 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 KCNA7Q96RP8 456 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 FMO2Q99518 471 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 FUT8Q9BYC5 575 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 RTN4RQ9BZR6 473 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 TAS2R9Q9NYW1 312 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 MED11Q9P086 117 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 MRPS18CQ9Y3D5 142 aaKnown RBP10.53□□□□□ -0.72
GARNL3-210ENST00000453030 FREM1Q5H8C1 2179 aa10.53□□□□□ -0.72
GARNL3-210ENST00000453030 UQCRHLA0A096LP55 91 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 OR2M5A3KFT3 312 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 TRIM64A6NGJ6 449 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 TRIM64BA6NI03 449 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 FAM171A2A8MVW0 826 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 SHISA8B8ZZ34 492 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 PLOD3O60568 738 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 ULK1O75385 1050 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 TAC1P20366 129 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 MPIP34949 423 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 NCBP2P52298 156 aaKnown RBP eCLIP10.52□□□□□ -0.73
GARNL3-210ENST00000453030 SUCLG1P53597 346 aaKnown RBP10.52□□□□□ -0.73
GARNL3-210ENST00000453030 CLDN20P56880 219 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 PSPHP78330 225 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 PSG6Q00889 435 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 GANABQ14697 944 aaKnown RBP10.52□□□□□ -0.73
GARNL3-210ENST00000453030 PON3Q15166 354 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 ACKR1Q16570 336 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 EXOC3L2Q2M3D2 409 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 ANKRD34AQ69YU3 496 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 RELL1Q8IUW5 271 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 LRRC75A-AS1Q8N1F1 130 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 IFT81Q8WYA0 676 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 PIP5K1AQ99755 562 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 STMN4Q9H169 189 aaPredicted RBP10.52□□□□□ -0.73
GARNL3-210ENST00000453030 TMEM216Q9P0N5 145 aa10.52□□□□□ -0.73
GARNL3-210ENST00000453030 DMGDHQ9UI17 866 aaKnown RBP10.52□□□□□ -0.73
GARNL3-210ENST00000453030 ZNF180Q9UJW8 692 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms