RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TMEM104Q8NE00 496 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR52E4Q8NGH9 312 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR5M1Q8NGP8 315 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR1S1Q8NH92 325 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR14A16Q8NHC5 309 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 WDR36Q8NI36 951 aaKnown RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CEP76Q8TAP6 659 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MRGPRDQ8TDS7 321 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CSGALNACT1Q8TDX6 532 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 SCARB1Q8WTV0 552 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM216AQ8WUB2 273 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CYGBQ8WWM9 190 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 LCN9Q8WX39 176 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADAMTS14Q8WXS8 1223 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 OSTF1Q92882 214 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM143Q96AN5 459 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 UPRTQ96BW1 309 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCDC126Q96EE4 140 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 NEIL1Q96FI4 390 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CELF6Q96J87 481 aaKnown RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PIWIL1Q96J94 861 aaKnown RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM84BQ96KN1 310 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MARK4Q96L34 752 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PPP1R36Q96LQ0 422 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 TEAD3Q99594 435 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CMSS1Q9BQ75 279 aaKnown RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 APOL2Q9BQE5 337 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHCHD6Q9BRQ6 235 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PCGF1Q9BSM1 259 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 H2AFJQ9BTM1 129 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 HTATIP2Q9BUP3 242 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 APOL6Q9BWW8 343 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 SGPP1Q9BX95 441 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 DGCR6LQ9BY27 220 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ITPAQ9BY32 194 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 BARHL1Q9BZE3 327 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 AMBRA1Q9C0C7 1298 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 GABARAPL1Q9H0R8 117 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MMP28Q9H239 520 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC26A1Q9H2B4 701 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 TOR3AQ9H497 397 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 RNPEPQ9H4A4 650 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF768Q9H5H4 540 aaKnown RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 DOCK5Q9H7D0 1870 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 WDR26Q9H7D7 661 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 NT5MQ9NPB1 228 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 IL23AQ9NPF7 189 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MIEF1Q9NQG6 463 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ENTPD7Q9NQZ7 604 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC22A11Q9NSA0 550 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZFP57Q9NU63 452 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM118AQ9NWS6 357 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZSCAN32Q9NX65 697 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 TAS2R14Q9NYV8 317 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MED11Q9P086 117 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 AASSQ9UDR5 926 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 SEC14L4Q9UDX3 406 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MARCOQ9UEW3 520 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PACSIN3Q9UKS6 424 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 DAPP1Q9UN19 280 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ING4Q9UNL4 249 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 DLGAP4Q9Y2H0 992 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 MMACHCQ9Y4U1 282 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PUS1Q9Y606 427 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDH10Q9Y6N8 788 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 STRCP1A6NGW2 1772 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PTPRJQ12913 1337 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 TBC1D3KA0A087X1G2 549 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 GNG14A0A1W2PPG7 69 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM218A2RU14 115 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 BTBD17A6NE02 478 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM90A18PA6NE21 464 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM90A16PA6NEW6 464 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NCF1BA6NI72 391 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR6C75A6NL08 312 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM90A9PA6NNJ1 464 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 COLCA2A8K830 154 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 BBIP1A8MTZ0 92 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 NCF1CA8MVU1 366 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM90A5PA8MXJ8 464 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCNU1A8MYU2 1149 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 MYO1GB0I1T2 1018 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 K7EP13 123 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 FXYD1O00168 92 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 WWP2O00308 870 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 ETV2O00321 342 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 PSMD3O43242 534 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 LRRTM2O43300 516 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 DHHO43323 396 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHMP2AO43633 222 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 ORC5O43913 435 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 LCMT2O60294 686 aaKnown RBP3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 VPS4BO75351 444 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 SEC22BO75396 215 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 CTAG2O75638 210 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 STC2O76061 302 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 BEST1O76090 585 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 AQP8O94778 261 aa3.39□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZFPL1O95159 310 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms