RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 MGAT2Q10469 447 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF155Q12901 538 aaPredicted RBP8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ENTPD8Q5MY95 495 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF730Q6ZMV8 503 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 PLEKHM3Q6ZWE6 761 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 PRSS48Q7RTY5 328 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZER1Q7Z7L7 766 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 VWA5B2Q8N398 1253 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 STX19Q8N4C7 294 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ARHGEF39Q8N4T4 335 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 SVOPQ8N4V2 548 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 CDRT4Q8N9R6 151 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 FNDC8Q8TC99 324 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 GGHQ92820 318 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 RIT1Q92963 219 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 MYDGFQ969H8 173 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 SLC38A4Q969I6 547 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 CLDN23Q96B33 292 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZDHHC12Q96GR4 267 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 CNDP2Q96KP4 475 aaKnown RBP8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 MCHR1Q99705 422 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ARHGDIGQ99819 225 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 SLX1AQ9BQ83 275 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ALOXE3Q9BYJ1 711 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 UCK1Q9HA47 277 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 ACOT13Q9NPJ3 140 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 SEMA4GQ9NTN9 838 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 PSORS1C1Q9UIG5 152 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 IFT52Q9Y366 437 aa8.88□□□□□ -0.99
COL6A4P1-201ENST00000446690 GXYLT2A0PJZ3 443 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 CLCA1A8K7I4 914 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 K7ESF4 209 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 AGRPO00253 132 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 SYT5O00445 386 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 PEX12O00623 359 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 STX11O75558 287 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 LCKP06239 509 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 STSP08842 583 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF182P17025 639 aaPredicted RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 MAOAP21397 527 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ARL4DP49703 201 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 PGDP52209 483 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 SKP1P63208 163 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ALDH6A1Q02252 535 aaKnown RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ILKQ13418 452 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 MAPK14Q16539 360 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 WDR45BQ5MNZ6 344 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 OGFOD3Q6PK18 319 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 CASP12Q6UXS9 341 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF836Q6ZNA1 936 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 PRICKLE2Q7Z3G6 844 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZBTB46Q86UZ6 589 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 DEFB123Q8N688 67 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 IQCF1Q8N6M8 205 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 HSPBAP1Q96EW2 488 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 DOK1Q99704 481 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 GPA33Q99795 319 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 FUZQ9BT04 418 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 PRTFDC1Q9NRG1 225 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 TBCCD1Q9NVR7 557 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 CLN6Q9NWW5 311 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 TVP23BQ9NYZ1 205 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 NDOR1Q9UHB4 597 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 PCDHGB1Q9Y5G3 927 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 SPEGQ15772 3267 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 LAMA1P25391 3075 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 A0A087WUU8 490 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 TLCD2A6NGC4 264 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 HRKO00198 91 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 CLDN4O14493 209 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 IFNA16P05015 189 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 GKN3PP0CG01 181 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 GABRB1P18505 474 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 SSTR4P31391 388 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 LSM3P62310 102 aaKnown RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ST3GAL3Q11203 375 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF267Q14586 743 aaPredicted RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 TRAM2Q15035 370 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 C17orf82Q86X59 251 aaPredicted RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 GALNT12Q8IXK2 581 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF619Q8N2I2 560 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 SLC25A45Q8N413 288 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ZNF614Q8N883 585 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 MORN4Q8NDC4 146 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 B3GNT7Q8NFL0 401 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 SLC35B4Q969S0 331 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 RNF31Q96EP0 1072 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 CNPPD1Q9BV87 410 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 FAIMQ9NVQ4 179 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 TMEM9Q9P0T7 183 aa8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 PAIP2BQ9ULR5 123 aaKnown RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 MRPS33Q9Y291 106 aaKnown RBP8.87□□□□□ -0.99
COL6A4P1-201ENST00000446690 ABCA7Q8IZY2 2146 aa8.86□□□□□ -0.99
COL6A4P1-201ENST00000446690 SCN2AQ99250 2005 aa8.86□□□□□ -0.99
COL6A4P1-201ENST00000446690 AGAP5A6NIR3 686 aa8.86□□□□□ -0.99
COL6A4P1-201ENST00000446690 TGFBR3LH3BV60 316 aa8.86□□□□□ -0.99
COL6A4P1-201ENST00000446690 BOLA2-SMG1P6H3BVE0 249 aa8.86□□□□□ -0.99
COL6A4P1-201ENST00000446690 CTNSO60931 367 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms