RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 DUSP5Q16690 384 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 FNDC7Q5VTL7 733 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 BICRALQ6AI39 1079 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 DESI1Q6ICB0 168 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 ARHGAP11AQ6P4F7 1023 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 FAM26EQ8N5C1 309 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 TRIML2Q8N7C3 387 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 OR1J4Q8NGS1 313 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 ADAMTS15Q8TE58 950 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 EFHD2Q96C19 240 aaPredicted RBP13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 C16orf58Q96GQ5 468 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 OR52E6Q96RD3 313 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 BTBD2Q9BX70 525 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 HHATLQ9HCP6 504 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 ACKR4Q9NPB9 350 aa13.76□□□□□ -0.21
CSNK1E-210ENST00000442216 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 MYO18BQ8IUG5 2567 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 A0A1B0GUH1 482 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 A0A1B0GVC2 190 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 GXYLT2A0PJZ3 443 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 FAM234BA2RU67 622 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 FAM166BA8MTA8 275 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 SNPHO15079 494 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 SUSD5O60279 629 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 HCN1O60741 890 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 KCNK2O95069 426 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 CPSF4O95639 269 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 NGFRP08138 427 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 EVI2BP34910 448 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 SOAT1P35610 550 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 ZFP36L2P47974 494 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 MAN2A2P49641 1150 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 CLK3P49761 638 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 ATP4BP51164 291 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 POLR2JP52435 117 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 DGKQP52824 942 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 POU6F2P78424 691 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 TXNL4AP83876 142 aaKnown RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 C4orf17Q53FE4 359 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 TIGD3Q6B0B8 471 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 C6orf120Q7Z4R8 191 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 ANKRD46Q86W74 232 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 SPPL2CQ8IUH8 684 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 COX18Q8N8Q8 333 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 MIPOL1Q8TD10 442 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 JADE3Q92613 823 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 RELTQ969Z4 430 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 RMND5BQ96G75 393 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 MARK4Q96L34 752 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 JSRP1Q96MG2 331 aaPredicted RBP13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 G6PC3Q9BUM1 346 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 DEFB127Q9H1M4 99 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 UBQLN3Q9H347 655 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 OSGIN2Q9Y236 505 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 SLC5A6Q9Y289 635 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 C15orf41Q9Y2V0 281 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 WIF1Q9Y5W5 379 aa13.75□□□□□ -0.21
CSNK1E-210ENST00000442216 PCNX3Q9H6A9 2034 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 RNF103-CHMP3A0A140T963 221 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 OR14I1A6ND48 311 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 DYNC1I1O14576 645 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 FADS1O60427 444 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 SLC19A2O60779 497 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 CBR3O75828 277 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 AK1P00568 194 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 RFPL3SP0C7P2 107 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 MATN1P21941 496 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 MDH1P40925 334 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 GAS1P54826 345 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 CASP6P55212 293 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 UBAP2LQ14157 1087 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 METTL21CQ5VZV1 264 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 SAXO2Q658L1 398 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 MYO7BQ6PIF6 2116 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 TRILQ7L0X0 811 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 CHERPQ8IWX8 916 aaKnown RBP13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 OR5AK3PQ8NH89 298 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 NEURL3Q96EH8 262 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 SLC35G5Q96KT7 338 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 PANX1Q96RD7 426 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 YIPF4Q9BSR8 244 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 RABEP2Q9H5N1 569 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 RMND5AQ9H871 391 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 GALNT9Q9HCQ5 603 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 SDHAF3Q9NRP4 125 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 TRIM33Q9UPN9 1127 aa13.74□□□□□ -0.21
CSNK1E-210ENST00000442216 PHF3Q92576 2039 aaKnown RBP13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 A0A1B0GTH9 108 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 AQP7O14520 342 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 CDC40O60508 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 AGR2O95994 175 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 IGKV1D-16P01601 117 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 HPNP05981 417 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 ZCCHC18P0CG32 403 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 TROVE2P10155 538 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 ABOP16442 354 aa13.73□□□□□ -0.21
CSNK1E-210ENST00000442216 GDF1P27539 372 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms