RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 SERPINB7O75635 380 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SLITRK5O94991 958 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 AGR2O95994 175 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 TFPTP0C1Z6 253 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 RNH1P13489 461 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 FPR1P21462 350 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NT5EP21589 574 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 DNAJA1P31689 397 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CAPGP40121 348 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CRISP3P54108 245 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 HPCAP84074 193 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 LINC00303Q3SY05 128 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MINDY4Q4G0A6 757 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NHSL2Q5HYW2 709 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ATAD3BQ5T9A4 648 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 MFSD4BQ5TF39 518 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PCSK4Q6UW60 755 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 LGI4Q8N135 537 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 OR5D16Q8NGK9 328 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SLC38A5Q8WUX1 472 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 XAGE5Q8WWM1 108 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 TTC9Q92623 222 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PROX1Q92786 737 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 KAT2AQ92830 837 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 C8orf44Q96CB5 159 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 YIPF4Q9BSR8 244 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SPATA5L1Q9BVQ7 753 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 ANKRD60Q9BZ19 345 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 VN1R1Q9GZP7 353 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 TRIM45Q9H8W5 580 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 CACYBPQ9HB71 228 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 EQTNQ9NQ60 294 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 LANCL2Q9NS86 450 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 C14orf105Q9NVL8 296 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 PTGFRNQ9P2B2 879 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 POLHQ9Y253 713 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SAMHD1Q9Y3Z3 626 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 HS3ST3B1Q9Y662 390 aa13.53□□□□□ -0.24
TNFRSF1A-204ENST00000440083 SOCS6O14544 535 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ASNA1O43681 348 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GCM2O75603 506 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DNAJB5O75953 348 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TNFAIP8O95379 198 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PGM3O95394 542 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GPR75O95800 540 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RECKO95980 971 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 HMGN2P05204 90 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 HEXBP07686 556 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CRYBA2P53672 197 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IST1P53990 364 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RAD23AP54725 363 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 EMP2P54851 167 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TPD52P55327 224 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ID2Q02363 134 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SSPNQ14714 243 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RFX4Q33E94 735 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CRTC2Q53ET0 693 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GPAT3Q53EU6 434 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TBPL2Q6SJ96 375 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 UGT2A3Q6UWM9 527 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 C16orf62Q7Z3J2 963 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CARM1Q86X55 608 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RAB43Q86YS6 212 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR4N5Q8IXE1 308 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TMEM52Q8NDY8 209 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF555Q8NEP9 628 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MIPOL1Q8TD10 442 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TFAP2CQ92754 450 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TSLPQ969D9 159 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR7D2Q96RA2 312 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 EPYCQ99645 322 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OSBPL10Q9BXB5 764 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ACTRT3Q9BYD9 372 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FAM117AQ9C073 453 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TGIF2Q9GZN2 237 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GABARAPL1Q9H0R8 117 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CLK4Q9HAZ1 481 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PNPLA3Q9NST1 481 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 EXD2Q9NVH0 621 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CALML5Q9NZT1 146 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SEC14L3Q9UDX4 400 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FBXL4Q9UKA2 621 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MKL2Q9ULH7 1088 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FAM32AQ9Y421 112 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 U3KQV3 271 aa13.52□□□□□ -0.25
TNFRSF1A-204ENST00000440083 H0YAE9 185 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PLOD2O00469 737 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CYR61O00622 381 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FGF17O60258 216 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR10H2O60403 315 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DPM1O60762 260 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LDB3O75112 727 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DIRAS1O95057 198 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IFNW1P05000 195 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ALPLP05186 524 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CD63P08962 238 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FAM87AP0C7U9 286 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CDH2P19022 906 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms