RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 DGCR6LQ9BY27 220 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 NLNQ9BYT8 704 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ANKRD19PQ9H560 264 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SYNPO2LQ9H987 977 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MRPS30Q9NP92 439 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 EXD2Q9NVH0 621 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 VNN3Q9NY84 501 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 NDUFAF4Q9P032 175 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SEC14L4Q9UDX3 406 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ABCG2Q9UNQ0 655 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MGAT4BQ9UQ53 548 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ENPP4Q9Y6X5 453 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MYO7BQ6PIF6 2116 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ICE1Q9Y2F5 2266 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 DSPPQ9NZW4 1301 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 FER1L5A0AVI2 2057 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 K7EM74 188 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 M0R3G1 203 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 MEN1O00255 615 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 TNFRSF11BO00300 401 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 FAAHO00519 579 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 FAM20BO75063 409 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CLEC3AO75596 197 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 LIPCP11150 499 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 IMPDH2P12268 514 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PNLIPP16233 465 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PORP16435 677 aaPredicted RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 GABRB1P18505 474 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ENDOUP21128 410 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 NEK2P51955 445 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CDC42P60953 191 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 RPP38P78345 283 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ABATP80404 500 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CDK6Q00534 326 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF45Q02386 682 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 TAP2Q03519 686 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 COX10Q12887 443 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SLBPQ14493 270 aaKnown RBP eCLIP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF181Q2M3W8 571 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM44Q2T9K0 475 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CATSPEREQ5SY80 951 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PRAMEF13Q5VWM6 474 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ADNP2Q6IQ32 1131 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 REEP3Q6NUK4 255 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 C16orf87Q6PH81 154 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 BHLHB9Q6PI77 547 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 FIGLAQ6QHK4 219 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 C6orf15Q6UXA7 325 aaPredicted RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 COMMD6Q7Z4G1 85 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 TMPRSS11BQ86T26 416 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 DNAJC22Q8N4W6 341 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 BMPERQ8N8U9 685 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ATG16L2Q8NAA4 619 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 TOR1AIP2Q8NFQ8 470 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 OR6Q1Q8NGQ2 317 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CLHC1Q8NHS4 586 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 WDR48Q8TAF3 677 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SLC39A7Q92504 469 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 NEIL2Q969S2 332 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SLC35A5Q9BS91 424 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 POLR2J2Q9GZM3 115 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 POLR2J3Q9H1A7 115 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 RIBC2Q9H4K1 309 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PIF1Q9H611 641 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 BCL2L10Q9HD36 194 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ISYNA1Q9NPH2 558 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 LHX9Q9NQ69 397 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 CTSFQ9UBX1 484 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SERTAD3Q9UJW9 196 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 ACAD8Q9UKU7 415 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 POMT2Q9UKY4 750 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SNX7Q9UNH6 387 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PTRH2Q9Y3E5 179 aaKnown RBP4.45□□□□□ -1.7
EDEM3-203ENST00000439962 PCDHGA6Q9Y5G7 932 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 HEBP2Q9Y5Z4 205 aa4.45□□□□□ -1.7
EDEM3-203ENST00000439962 SPG11Q96JI7 2443 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 A0A0A6YYC8 382 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 IGHV3-20A0A0C4DH32 117 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 PNMA8CA0A1B0GUJ8 204 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 A0A1B0GVG6 124 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 GNG14A0A1W2PPG7 69 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM247A6NEH6 219 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TMEM229AB2RXF0 380 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 I3L1I5 382 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZSCAN9O15535 394 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 WBP4O75554 376 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CPSF4O95639 269 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MT-ND1P03886 318 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CBLP22681 906 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CHMP24386 653 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 STT3AP46977 705 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MLLT10P55197 1068 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TMPRSS3P57727 454 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DSTNP60981 165 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 RAB8AP61006 207 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 RPS13P62277 151 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 RHAGQ02094 409 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 PRKCDQ05655 676 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 EIF3IQ13347 325 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms