RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 CCDC116Q8IYX3 515 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 GBP7Q8N8V2 638 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-213ENST00000436675 FADS6Q8N9I5 356 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 MRRFQ96E11 262 aaKnown RBP13.28□□□□□ -0.28
HDAC8-213ENST00000436675 BTBD9Q96Q07 612 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 FRG2BQ96QU4 278 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 TMEM204Q9BSN7 226 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 ACTR6Q9GZN1 396 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 STMN4Q9H169 189 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-213ENST00000436675 SLCO5A1Q9H2Y9 848 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 FOLH1BQ9HBA9 442 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 FARSBQ9NSD9 589 aaKnown RBP13.28□□□□□ -0.28
HDAC8-213ENST00000436675 FLRT3Q9NZU0 649 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 PSME2Q9UL46 239 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 LIPT1Q9Y234 373 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 EMC9Q9Y3B6 208 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 FREM1Q5H8C1 2179 aa13.28□□□□□ -0.28
HDAC8-213ENST00000436675 A8MV72 311 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-213ENST00000436675 OVOL3O00110 214 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 TMCC2O75069 709 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 ADAM11O75078 769 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 ESRRBO95718 433 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 EVI2BP34910 448 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 EIF1AXP47813 144 aaKnown RBP13.27□□□□□ -0.29
HDAC8-213ENST00000436675 PNLIPRP2P54317 469 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF628Q5EBL2 1059 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 LILRB1Q8NHL6 650 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF681Q96N22 645 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 NSUN5Q96P11 429 aaKnown RBP13.27□□□□□ -0.29
HDAC8-213ENST00000436675 NTMT1Q9BV86 223 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 RTN4RQ9BZR6 473 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 DPH5Q9H2P9 285 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 C12orf49Q9H741 205 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 PLSCR4Q9NRQ2 329 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 UTS2RQ9UKP6 389 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 OR10H1Q9Y4A9 318 aa13.27□□□□□ -0.29
HDAC8-213ENST00000436675 HAX1O00165 279 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 EIF1AYO14602 144 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 GPRIN2O60269 458 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 F12P00748 615 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 IGHV4-39P01824 125 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 OPN1LWP04000 364 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 CTAGE8P0CG41 777 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 YLPM1P49750 1951 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF844Q08AG5 666 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 GALNT1Q10472 559 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 TSC22D1Q15714 1073 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 ETFDHQ16134 617 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 FAM83EQ2M2I3 478 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 ERCC6LQ2NKX8 1250 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 CTAGE4Q8IX94 777 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF619Q8N2I2 560 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 PTGR2Q8N8N7 351 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 OR6K3Q8NGY3 331 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 RHEBL1Q8TAI7 183 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 UHMK1Q8TAS1 419 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 TRPC4APQ8TEL6 797 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 RNF138Q8WVD3 245 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 GFM2Q969S9 779 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 FBXW5Q969U6 566 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 EXOSC8Q96B26 276 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 PHF21BQ96EK2 531 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 VSTM2LQ96N03 204 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 TACO1Q9BSH4 297 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 FAIM2Q9BWQ8 316 aa13.26□□□□□ -0.29
HDAC8-213ENST00000436675 GDF2Q9UK05 429 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 TNPO3Q9Y5L0 923 aaKnown RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 MAGED1Q9Y5V3 778 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-213ENST00000436675 PDYNP01213 254 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 ALDOAP04075 364 aaKnown RBP13.25□□□□□ -0.29
HDAC8-213ENST00000436675 C2P06681 752 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 FCGR2AP12318 317 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 SRSF2Q01130 221 aaKnown RBP13.25□□□□□ -0.29
HDAC8-213ENST00000436675 ZNF155Q12901 538 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-213ENST00000436675 TRAF3Q13114 568 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 KRTAP24-1Q3LI83 254 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 MROH9Q5TGP6 573 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 RPS27LQ71UM5 84 aaKnown RBP13.25□□□□□ -0.29
HDAC8-213ENST00000436675 MARCH3Q86UD3 253 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 C1orf52Q8N6N3 182 aaKnown RBP13.25□□□□□ -0.29
HDAC8-213ENST00000436675 METTL25Q8N6Q8 603 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 CEP112Q8N8E3 955 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 DUSP19Q8WTR2 217 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 SMAP2Q8WU79 429 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-213ENST00000436675 C1GALT1C1Q96EU7 318 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 HBEGFQ99075 208 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 ELOVL6Q9H5J4 265 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 PTGES2Q9H7Z7 377 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 ZBTB26Q9HCK0 441 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 RNF115Q9Y4L5 304 aa13.25□□□□□ -0.29
HDAC8-213ENST00000436675 A0A1W2PP18 115 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 FADS1O60427 444 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 BCAS2O75934 225 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-213ENST00000436675 NTN1O95631 604 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 CD3EP07766 207 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 DANCRP0C864 163 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
HDAC8-213ENST00000436675 TCP1P17987 556 aaKnown RBP13.24□□□□□ -0.29
HDAC8-213ENST00000436675 TSPAN8P19075 237 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms