RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF542PQ5EBM4 170 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ZCCHC12Q6PEW1 402 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 RBM12BQ8IXT5 1001 aaKnown RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CSNK1A1LQ8N752 337 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 FLCNQ8NFG4 579 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 OR5T3Q8NGG3 340 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 WDR36Q8NI36 951 aaKnown RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ACOT11Q8WXI4 607 aaPredicted RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 COL26A1Q96A83 441 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ANKRD9Q96BM1 317 aaPredicted RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF582Q96NG8 517 aaPredicted RBP13.02□□□□□ -0.33
HOXC4-202ENST00000430889 STACQ99469 402 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CENPOQ9BU64 300 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 SLC2A4RGQ9NR83 387 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 DUSP22Q9NRW4 184 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 TVP23BQ9NYZ1 205 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 MAT2BQ9NZL9 334 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CLEC2DQ9UHP7 191 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 NTNG1Q9Y2I2 539 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 WDR45Q9Y484 360 aa13.02□□□□□ -0.33
HOXC4-202ENST00000430889 CHURC1-FNTBB4DL54 471 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 CCRL2O00421 344 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 UBXN7O94888 489 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 LYPD3O95274 346 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 FPR3P25089 353 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 RGS19P49795 217 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SMSP52788 366 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SHC2P98077 582 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 ID2Q02363 134 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 TMED1Q13445 227 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 MAPK14Q16539 360 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 TSTQ16762 297 aaKnown RBP13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SOWAHCQ53LP3 525 aaPredicted RBP13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SYT13Q7L8C5 426 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 GDF7Q7Z4P5 450 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF438Q7Z4V0 828 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 TAF8Q7Z7C8 310 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 OOSP2Q86WS3 158 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 NKAIN4Q8IVV8 208 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF655Q8N720 491 aaPredicted RBP13.01□□□□□ -0.33
HOXC4-202ENST00000430889 NANOGP1Q8N7R0 232 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 TOR1AIP2Q8NFQ8 470 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SLC9A6Q92581 669 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 COX4I2Q96KJ9 171 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 MCHR1Q99705 422 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 CDADC1Q9BWV3 514 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 MMP27Q9H306 513 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SEMA6CQ9H3T2 930 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 DSN1Q9H410 356 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 TRIM45Q9H8W5 580 aaPredicted RBP13.01□□□□□ -0.33
HOXC4-202ENST00000430889 FAM60AQ9NP50 221 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 SLC13A4Q9UKG4 626 aa13.01□□□□□ -0.33
HOXC4-202ENST00000430889 DIMT1Q9UNQ2 313 aaKnown RBP13.01□□□□□ -0.33
HOXC4-202ENST00000430889 TLX2O43763 284 aaPredicted RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 KIAA0513O60268 411 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 LDB3O75112 727 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 CTSBP07858 339 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 HBQ1P09105 142 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 CT62P0C5K7 136 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 ST6GAL1P15907 406 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 IFNGR2P38484 337 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 AVPR1BP47901 424 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 RAB38P57729 211 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 RGS8P57771 180 aaPredicted RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 HOXC5Q00444 222 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 PLAURQ03405 335 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF404Q494X3 552 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 CHCHD2P9Q5T1J5 151 aaPredicted RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 MEX3DQ86XN8 651 aaKnown RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 PEX5LQ8IYB4 626 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 CACTIN-AS1Q8N1I8 211 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 ZNF619Q8N2I2 560 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 CDRT4Q8N9R6 151 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 DRAXINQ8NBI3 349 aaPredicted RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 KBTBD8Q8NFY9 601 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 OR52I1Q8NGK6 324 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 TMEM163Q8TC26 289 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 PPP1R14BQ96C90 147 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 SLC41A3Q96GZ6 507 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 LRRC61Q9BV99 259 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 GPR174Q9BXC1 333 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 POLR2J2Q9GZM3 115 aaKnown RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 NDRG2Q9UN36 371 aaKnown RBP13□□□□□ -0.33
HOXC4-202ENST00000430889 THADAQ6YHU6 1953 aa13□□□□□ -0.33
HOXC4-202ENST00000430889 EYSQ5T1H1 3165 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 KDM4EB2RXH2 506 aaPredicted RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 MBTPS2O43462 519 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 GPX5O75715 221 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 EIF2S1P05198 315 aaKnown RBP12.99□□□□□ -0.33
HOXC4-202ENST00000430889 CCNYL3P0C7X3 344 aa12.99□□□□□ -0.33
HOXC4-202ENST00000430889 STAT5AP42229 794 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms