RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 TRPC1P48995 793 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 MANFP55145 182 aaKnown RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 KCNJ2P63252 427 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 PMPCAQ10713 525 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 SLC10A1Q14973 349 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 FNDC7Q5VTL7 733 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 TMEM107Q6UX40 140 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 JSRP1Q96MG2 331 aaPredicted RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 ELAC2Q9BQ52 826 aaKnown RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 RABEP2Q9H5N1 569 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 ZNF703Q9H7S9 590 aaPredicted RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 RNF6Q9Y252 685 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 FAM215AQ9Y5M1 114 aa15.51■□□□□ 0.07
UBE3D-204ENST00000430071 ANKRD17O75179 2603 aaKnown RBP15.51■□□□□ 0.07
UBE3D-204ENST00000430071 KDM4EB2RXH2 506 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-204ENST00000430071 PLOD2O00469 737 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 PLOD3O60568 738 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 C6orf47O95873 294 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 CD1EP15812 388 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ATP4BP51164 291 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 STX1BP61266 288 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 MLC1Q15049 377 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 DPY19L1Q2PZI1 675 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 METTL21CQ5VZV1 264 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ZNF585AQ6P3V2 769 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 CLECL1Q8IZS7 167 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 GLB1L3Q8NCI6 653 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-204ENST00000430071 OR7G1Q8NGA0 311 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 OR52R1Q8NGF1 315 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ZFP28Q8NHY6 868 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 OR5P2Q8WZ92 322 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 DIO2Q92813 273 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 TP53INP1Q96A56 240 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ELP4Q96EB1 424 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ZBTB18Q99592 522 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ITPAQ9BY32 194 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 TRIM8Q9BZR9 551 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 TP63Q9H3D4 680 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-204ENST00000430071 ZFP64Q9NPA5 681 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 SIRT3Q9NTG7 399 aaPredicted RBP15.5■□□□□ 0.07
UBE3D-204ENST00000430071 BCAP29Q9UHQ4 241 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 TRIM33Q9UPN9 1127 aa15.5■□□□□ 0.07
UBE3D-204ENST00000430071 A0A087WV62 115 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 NKX2-6A6NCS4 301 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 UPK1AO00322 258 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 TRIM3O75382 744 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 SLITRK5O94991 958 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 ABCD3P28288 659 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 S100A3P33764 101 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 GPC1P35052 558 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 MAN2A2P49641 1150 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 SQLEQ14534 574 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 HLA-DQA1Q5Y7H0 255 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 SPATA21Q7Z572 469 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 ANKRD46Q86W74 232 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 FUNDC1Q8IVP5 155 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 TAGAPQ8N103 731 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 NATD1Q8N6N6 113 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 SPPL2AQ8TCT8 520 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 ERP27Q96DN0 273 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 DOHHQ9BU89 302 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 LDAHQ9H6V9 325 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 CXorf36Q9H7Y0 433 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 CHST11Q9NPF2 352 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 CNIH4Q9P003 139 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 ADAM21Q9UKJ8 722 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 OTOGQ6ZRI0 2925 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 TRGV5A0A0B4J1U4 118 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 FAM234BA2RU67 622 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 C2orf72A6NCS6 295 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 FAM90A27PA6NNH2 459 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 RNASET2O00584 256 aaKnown RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 AQP7O14520 342 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 SNX3O60493 162 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 PGRP06401 933 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 ABCB1P08183 1280 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 COX6B1P14854 86 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 CASP3P42574 277 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 EMDP50402 254 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 POLR2JP52435 117 aaKnown RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 HBA1P69905 142 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 IRX1P78414 480 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 CPLX4Q7Z7G2 160 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 OR2L13Q8N349 312 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 PSMA8Q8TAA3 256 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 CA5BP1Q8WTZ4 195 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 NTNG2Q96CW9 530 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 NODALQ96S42 347 aa15.49■□□□□ 0.07
UBE3D-204ENST00000430071 NSRP1Q9H0G5 558 aaKnown RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 DDX18Q9NVP1 670 aaKnown RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 FAM120CQ9NX05 1096 aaKnown RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 C19orf53Q9UNZ5 99 aaPredicted RBP15.49■□□□□ 0.07
UBE3D-204ENST00000430071 PRSS51A0A1B0GVH4 220 aa15.48■□□□□ 0.07
UBE3D-204ENST00000430071 SUSD5O60279 629 aa15.48■□□□□ 0.07
UBE3D-204ENST00000430071 SHOX2O60902 331 aaPredicted RBP15.48■□□□□ 0.07
UBE3D-204ENST00000430071 PSMG1O95456 288 aa15.48■□□□□ 0.07
UBE3D-204ENST00000430071 IFI6P09912 130 aa15.48■□□□□ 0.07
UBE3D-204ENST00000430071 ACVR2AP27037 513 aa15.48■□□□□ 0.07
UBE3D-204ENST00000430071 ADH7P40394 386 aa15.48■□□□□ 0.07
UBE3D-204ENST00000430071 PTGDSP41222 190 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms