RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ACVR1BP36896 505 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SLC9A3P48764 834 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SIM1P81133 766 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 LARS2Q15031 903 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 C6orf132Q5T0Z8 1188 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 MLIPQ5VWP3 458 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 MZT2BQ6NZ67 158 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PGBD2Q6P3X8 592 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 MRPL43Q8N983 215 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 CYB561A3Q8NBI2 242 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 UXS1Q8NBZ7 420 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 IL17RDQ8NFM7 739 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 GPR32P1Q8NGA4 272 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 OR9A2Q8NGT5 310 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SMAP2Q8WU79 429 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 AP3S1Q92572 193 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 TRMT61AQ96FX7 289 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZNF354BQ96LW1 612 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 MCHR1Q99705 422 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 KLHL31Q9H511 634 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 WDR26Q9H7D7 661 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 C3orf14Q9HBI5 128 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SLC35C2Q9NQQ7 365 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 KNTC1P50748 2209 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZC3H12DA2A288 527 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 SH3D21A4FU49 640 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZAR1LA6NP61 321 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 HNRNPCL2B2RXH8 293 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 MID1O15344 667 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SRPRAP08240 638 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 HBQ1P09105 142 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 POU3F3P20264 500 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 PRKACBP22694 351 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PRPH2P23942 346 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 AHRP35869 848 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 UGT2B10P36537 528 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 KHKP50053 298 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PRR5P85299 388 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 CHRNEQ04844 493 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 HYAL1Q12794 435 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 DEFB134Q4QY38 66 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 KLHL22Q53GT1 634 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 CNIH2Q6PI25 160 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 BHLHB9Q6PI77 547 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZC3H14Q6PJT7 736 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 ERN2Q76MJ5 926 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 ABI3BPQ7Z7G0 1075 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 TMC8Q8IU68 726 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PHC2Q8IXK0 858 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 KLHDC8AQ8IYD2 350 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ANKRD53Q8N9V6 530 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 OR4D11Q8NGI4 311 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 RASSF5Q8WWW0 418 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZG16BQ96DA0 208 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZNF514Q96K75 400 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZDHHC5Q9C0B5 715 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 MOV10Q9HCE1 1003 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 KLK4Q9Y5K2 254 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 TNFRSF10AO00220 468 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 HMGN4O00479 90 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 GYPBP06028 91 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 GKN3PP0CG01 181 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 CSNK2A2P19784 350 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 NT5EP21589 574 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 RAD52P43351 418 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 MVDP53602 400 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZNF234Q14588 700 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 NNATQ16517 81 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 OR4C11Q6IEV9 310 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PLBD1Q6P4A8 553 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 CADM2Q8N3J6 435 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZNF557Q8N988 423 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 OR52L1Q8NGH7 329 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 ZNF671Q8TAW3 534 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 EFHD2Q96C19 240 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 CXorf40BQ96DE9 158 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 TXNDC15Q96J42 360 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 IFT27Q9BW83 186 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PLA2G12AQ9BZM1 189 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 SPRTNQ9H040 489 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 GLIPR2Q9H4G4 154 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 CCDC59Q9P031 241 aaKnown RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 TNFRSF10DQ9UBN6 386 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 TMEM5Q9Y2B1 443 aa7.58□□□□□ -1.2
HPS4-205ENST00000429411 PCYT1BQ9Y5K3 369 aaPredicted RBP7.58□□□□□ -1.2
HPS4-205ENST00000429411 CFAP54Q96N23 3096 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 J3QLW9 94 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 GUCY1B2O75343 617 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 SLC2A10O95528 541 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 SCG5P05408 212 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 ADRA2AP08913 450 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 ZNF19P17023 458 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 FUT1P19526 365 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 GCGRP47871 477 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 CCR4P51679 360 aa7.57□□□□□ -1.2
HPS4-205ENST00000429411 WNT4P56705 351 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms