RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 OR51V1Q9H2C8 321 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 RMI1Q9H9A7 625 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 TBC1D17Q9HA65 648 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 AKIP1Q9NQ31 210 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 THSD1Q9NS62 852 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 OBP2AQ9NY56 170 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 ATMQ13315 3056 aa7.84□□□□□ -1.15
CD44-208ENST00000428726 E9PQ18 207 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 H0YGG7 62 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 MAN2B1O00754 1011 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 FGF17O60258 216 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 CSF2P04141 144 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 ERGP11308 486 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 ANXA8P13928 327 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 ST6GAL1P15907 406 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 UGT2B7P16662 529 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 GABRG2P18507 467 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 CD40LGP29965 261 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 GRPRP30550 384 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 GGT2P36268 569 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 CCR4P51679 360 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 RGS8P57771 180 aaPredicted RBP7.84□□□□□ -1.16
CD44-208ENST00000428726 SRP54P61011 504 aaKnown RBP7.84□□□□□ -1.16
CD44-208ENST00000428726 ARF3P61204 181 aaPredicted RBP7.84□□□□□ -1.16
CD44-208ENST00000428726 RACK1P63244 317 aaKnown RBP7.84□□□□□ -1.16
CD44-208ENST00000428726 REEP5Q00765 189 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 SMAD2Q15796 467 aaKnown RBP7.84□□□□□ -1.16
CD44-208ENST00000428726 DUSP5Q16690 384 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 TSSK4Q6SA08 328 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 CASP12Q6UXS9 341 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 CADM2Q8N3J6 435 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 MFSD4AQ8N468 514 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 DNAJC22Q8N4W6 341 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 PFN4Q8NHR9 129 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 OR5P2Q8WZ92 322 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 SLC6A18Q96N87 628 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 NDEL1Q9GZM8 345 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 PCBD2Q9H0N5 130 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 ZNF780BQ9Y6R6 833 aa7.84□□□□□ -1.16
CD44-208ENST00000428726 A0A087WUU8 490 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 C2orf92A0A1B0GVN3 265 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 TTC36A6NLP5 189 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 A8MVJ9 347 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 PLD2O14939 933 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 NDUFB5O43674 189 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 KCNK2O95069 426 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 SNX4O95219 450 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 RPS7P62081 194 aaKnown RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 TGM3Q08188 693 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 CCDC157Q569K6 752 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 SYT6Q5T7P8 510 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 ATAD3BQ5T9A4 648 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 RSBN1Q5VWQ0 802 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 MTFR2Q6P444 385 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 FIGLAQ6QHK4 219 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 NUDT18Q6ZVK8 323 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 PRSS48Q7RTY5 328 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 NANOGNBQ7Z5D8 188 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 UBE2Q1Q7Z7E8 422 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 SYT9Q86SS6 491 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 RAB42Q8N4Z0 105 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 RHOXF1Q8NHV9 184 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 THAP3Q8WTV1 239 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 SLC35B4Q969S0 331 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 QRFPRQ96P65 431 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 HDHD5Q9BXW7 423 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 DPH1Q9BZG8 443 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 UCK2Q9BZX2 261 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 PALMDQ9NP74 551 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 POLMQ9NP87 494 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 ASB4Q9Y574 426 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 TP53BP1Q12888 1972 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 TRAV27A0A087WT01 109 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 SLC9B1P1A6NJY1 282 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 FAM170BA6NMN3 283 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 CLCA1A8K7I4 914 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 KIAA0513O60268 411 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 TBX19O60806 448 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 GABARAPO95166 117 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 MED26O95402 600 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 MAOAP21397 527 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 ACVR2AP27037 513 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 CMPK1P30085 196 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 GFERP55789 205 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 PCBP4P57723 403 aaKnown RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 C22orf42Q6IC83 251 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 PGBD2Q6P3X8 592 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 LYPD4Q6UWN0 246 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 C16orf47Q6ZP98 133 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 OR4C15Q8NGM1 316 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 OR8D4Q8NGM9 314 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 OR5M3Q8NGP4 307 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 OR6Q1Q8NGQ2 317 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 NEURL3Q96EH8 262 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 NEDD4LQ96PU5 975 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 DCLRE1CQ96SD1 692 aaKnown RBP7.83□□□□□ -1.16
CD44-208ENST00000428726 MGLLQ99685 303 aa7.83□□□□□ -1.16
CD44-208ENST00000428726 TMED9Q9BVK6 235 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms