RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 BBS10Q8TAM1 723 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 HOXB13Q92826 284 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 UTP4Q969X6 686 aaKnown RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TP53INP1Q96A56 240 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 EFHD2Q96C19 240 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 ASB9Q96DX5 294 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 HSPBAP1Q96EW2 488 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 LRGUKQ96M69 825 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 NSMCE2Q96MF7 247 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TREX2Q9BQ50 279 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 G6PC3Q9BUM1 346 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF350Q9GZX5 532 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 LHPPQ9H008 270 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 PCDHAC1Q9H158 963 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 ING2Q9H160 280 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 MMADHCQ9H3L0 296 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 MUC13Q9H3R2 512 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TRIM45Q9H8W5 580 aaPredicted RBP7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 CALML5Q9NZT1 146 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 CD300AQ9UGN4 299 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 TEKT2Q9UIF3 430 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 WDR45Q9Y484 360 aa7.31□□□□□ -1.24
HMGA1P4-201ENST00000428643 NPIPA5A0A0B4J1W7 369 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PRAMEF27A3QJZ7 478 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMEM200CA6NKL6 621 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 NPIPA7E9PJI5 369 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 TO15178 435 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 KIAA0513O60268 411 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 MAN1A2O60476 641 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ITGA10O75578 1167 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PPM1BO75688 479 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 KCNK2O95069 426 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PGM3O95394 542 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 IL33O95760 270 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF682O95780 498 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 IGKV1D-16P01601 117 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 OPN1SWP03999 348 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ALPPP05187 535 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 NPIPA8P0DM63 369 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ATP6V1B2P21281 511 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 HTR1EP28566 365 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CASRP41180 1078 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ERFP50548 548 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 SSR4P51571 173 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PSMD4P55036 377 aaKnown RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 UCNP55089 124 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMPRSS3P57727 454 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 MLF1P58340 268 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CHRNEQ04844 493 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 VEZF1Q14119 521 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 TRIM25Q14258 630 aaKnown RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 GPR68Q15743 365 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ARHGAP11BQ3KRB8 267 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 FLYWCH1Q4VC44 716 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ACER2Q5QJU3 275 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PRAMEF8Q5VWM4 474 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PRAMEF7Q5VXH5 474 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 B3GNTL1Q67FW5 361 aaPredicted RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 GLYATQ6IB77 296 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CYP2R1Q6VVX0 501 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 FRRS1Q6ZNA5 592 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 LRRC74BQ6ZQY2 392 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZAR1Q86SH2 424 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PATL1Q86TB9 770 aaKnown RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 PTRH1Q86Y79 214 aaKnown RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF619Q8N2I2 560 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 GALNT16Q8N428 558 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMEM156Q8N614 296 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 METTL25Q8N6Q8 603 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF614Q8N883 585 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 FAM13CQ8NE31 585 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 BHLHE22Q8NFJ8 381 aaPredicted RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 SPPL2AQ8TCT8 520 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 SLC26A7Q8TE54 656 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ASB15Q8WXK1 588 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 SPACA9Q96E40 222 aaPredicted RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 RSRC1Q96IZ7 334 aaKnown RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 COL21A1Q96P44 957 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 RASL10BQ96S79 203 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF607Q96SK3 696 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ADOQ96SZ5 270 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 SDF2Q99470 211 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CDCP1Q9H5V8 836 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 RUBCNLQ9H714 662 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CPNE5Q9HCH3 593 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 POLE3Q9NRF9 147 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 GPR83Q9NYM4 423 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ABI3Q9P2A4 366 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 SEC14L3Q9UDX4 400 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 MKLN1Q9UL63 735 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 POMPQ9Y244 141 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 YARS2Q9Y2Z4 477 aaKnown RBP7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 ZNF451Q9Y4E5 1061 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 V9GYQ6 96 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 CFAP47Q6ZTR5 3102 aa7.3□□□□□ -1.24
HMGA1P4-201ENST00000428643 A0A0G2JPF8 293 aa7.29□□□□□ -1.24
HMGA1P4-201ENST00000428643 TMEM8BA6NDV4 472 aa7.29□□□□□ -1.24
HMGA1P4-201ENST00000428643 HNRNPCL2B2RXH8 293 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms