RNA–Protein interactions for RNA: ENST00000428450.5

DDX39B-209, Transcript of DExD-box helicase 39B, humanhuman

TSL 4

Gene DDX39B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-209ENST00000428450 GOLGA8NF8WBI6 632 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 SLCO1B7G3V0H7 640 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 GOLGA8RI6L899 631 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 EIF1AYO14602 144 aaKnown RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 ABCD4O14678 606 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 CCNT2O60583 730 aaKnown RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 BANF1O75531 89 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 TTC4O95801 387 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 FGGP02679 453 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 CCDC166P0CW27 439 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 APEHP13798 732 aaKnown RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 IL32P24001 234 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 NR4A2P43354 598 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 EFNA4P52798 201 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 GANABQ14697 944 aaKnown RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 SLMAPQ14BN4 828 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 PDCD2Q16342 344 aaPredicted RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 TMEM44Q2T9K0 475 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 TRMT12Q53H54 448 aaKnown RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 SPANXN3Q5MJ09 141 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 C6orf163Q5TEZ5 329 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 HIST2H2BDQ6DRA6 164 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 PPP4R4Q6NUP7 873 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 TTC27Q6P3X3 843 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 CYP20A1Q6UW02 462 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 TFAP2EQ6VUC0 442 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 IGDCC3Q8IVU1 814 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 MUC15Q8N387 334 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 SPATA6LQ8N4H0 392 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 OR52B6Q8NGF0 335 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 OR52R1Q8NGF1 315 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 OR10D3Q8NH80 312 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 DHRS9Q9BPW9 319 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 POTEKPQ9BYX7 375 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 RTN4RQ9BZR6 473 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 BRINP2Q9C0B6 783 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 BHLHE41Q9C0J9 482 aaPredicted RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 DDX47Q9H0S4 455 aaKnown RBP10.19□□□□□ -0.78
DDX39B-209ENST00000428450 ZNF696Q9H7X3 374 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 SMYD2Q9NRG4 433 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 PPP4R1LQ9P1A2 415 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 CES1P1Q9UKY3 287 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 TSC22D4Q9Y3Q8 395 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 PSAT1Q9Y617 370 aa10.19□□□□□ -0.78
DDX39B-209ENST00000428450 SHISA8B8ZZ34 492 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 WISP3O95389 354 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 ADAP00813 363 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 ATP1B1P05026 303 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 TUBBP07437 444 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 CT45A8P0DMV1 189 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 CT45A9P0DMV2 189 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 PTX3P26022 381 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 PNLIPRP2P54317 469 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 ACTG1P63261 375 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 DUSP2Q05923 314 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 EFR3AQ14156 821 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 GLYR1Q49A26 553 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 GLIPR1L2Q4G1C9 344 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 MSS51Q4VC12 460 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 CT45A2Q5DJT8 189 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 GRHL2Q6ISB3 625 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 TRMT10BQ6PF06 316 aaKnown RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 LARP4Q71RC2 724 aaKnown RBP eCLIP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 GALNT10Q86SR1 603 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 ZC3HC1Q86WB0 502 aaKnown RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 PDPRQ8NCN5 879 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 GCDHQ92947 438 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 KISS1RQ969F8 398 aaPredicted RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 C3orf49Q96BT1 292 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 C1GALT1C1Q96EU7 318 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 BTBD9Q96Q07 612 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 CD244Q9BZW8 370 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 DERL2Q9GZP9 239 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 PPANQ9NQ55 473 aaKnown RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 NPAP1Q9NZP6 1156 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 PRODH2Q9UF12 536 aa10.18□□□□□ -0.78
DDX39B-209ENST00000428450 MCTS1Q9ULC4 181 aaKnown RBP10.18□□□□□ -0.78
DDX39B-209ENST00000428450 FAM95CA0A1B0GW59 222 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 TMPRSS2O15393 492 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 SCO2O43819 266 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 CXCL13O43927 109 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 FADS1O60427 444 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 NME6O75414 186 aaPredicted RBP10.17□□□□□ -0.78
DDX39B-209ENST00000428450 COL6A2P12110 1019 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 SRP14P37108 136 aaKnown RBP10.17□□□□□ -0.78
DDX39B-209ENST00000428450 CORO7P57737 925 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 GPX6P59796 221 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 ITGADQ13349 1161 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 CUL3Q13618 768 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 OR4D1Q15615 310 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 NPSR1Q6W5P4 371 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 Q6ZSR9 355 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 LRRC70Q7Z2Q7 622 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 NUFIP2Q7Z417 695 aaKnown RBP10.17□□□□□ -0.78
DDX39B-209ENST00000428450 CCDC25Q86WR0 208 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 NUDT13Q86X67 352 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 TXLNBQ8N3L3 684 aa10.17□□□□□ -0.78
DDX39B-209ENST00000428450 RNF10Q8N5U6 811 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms