RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GAS1P54826 345 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 FBXW4P57775 412 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 GPR85P60893 370 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 EXOSC7Q15024 291 aaKnown RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 LTB4RQ15722 352 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ZNF630Q2M218 657 aaPredicted RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 GXYLT1Q4G148 440 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 RIPPLY2Q5TAB7 128 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ANXA8L1Q5VT79 327 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 IL23RQ5VWK5 629 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 VASNQ6EMK4 673 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 NPSR1Q6W5P4 371 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ZCCHC23Q6ZST2 131 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MSANTD1Q6ZTZ1 278 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 HDXQ7Z353 690 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MTERF4Q7Z6M4 381 aaKnown RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PLCZ1Q86YW0 608 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ZNF781Q8N8C0 355 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ADCY4Q8NFM4 1077 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 OR1J4Q8NGS1 313 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PIWIL2Q8TC59 973 aaKnown RBP8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ZPLD1Q8TCW7 415 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 ACTRT2Q8TDY3 377 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 GIMAP5Q96F15 307 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 C3orf30Q96M34 536 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 C7orf26Q96N11 449 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 TSSK3Q96PN8 268 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 HOXD1Q9GZZ0 328 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PIGUQ9H490 435 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 METTL7AQ9H8H3 244 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 KCNK9Q9NPC2 374 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 POLE3Q9NRF9 147 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 MRGBPQ9NV56 204 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 COQ3Q9NZJ6 369 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 SH3BP4Q9P0V3 963 aa8.35□□□□□ -1.07
SMC1A-203ENST00000428014 PKDREJQ9NTG1 2253 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CENPEQ02224 2701 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 ANKHD1Q8IWZ3 2542 aaKnown RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 PRSS51A0A1B0GVH4 220 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 A0A1W2PRB8 838 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 C7orf72A4D263 438 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CD8B2A6NJW9 211 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 ITM2AO43736 263 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 FADS1O60427 444 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 PEX11AO75192 247 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 REM1O75628 298 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 GOSR1O95249 250 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CLDN14O95500 239 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 EPPINO95925 133 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CHRNB4P30926 498 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 GPC1P35052 558 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 MASP1P48740 699 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 DSCR4P56555 118 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 MAGOHP61326 146 aaKnown RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CRYZQ08257 329 aaKnown RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 C17orf67Q0P5P2 114 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 GSTA3Q16772 222 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 GALNTL6Q49A17 601 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 EMC4Q5J8M3 183 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CES4AQ5XG92 561 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CDC73Q6P1J9 531 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 ENPP6Q6UWR7 440 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 TMEM107Q6UX40 140 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 B3GNT6Q6ZMB0 384 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 MRGPRGQ86SM5 289 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 FJX1Q86VR8 437 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 LIX1Q8N485 282 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 FADS6Q8N9I5 356 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 WDSUB1Q8N9V3 476 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 TOR1AIP2Q8NFQ8 470 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 LILRB4Q8NHJ6 448 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 RND1Q92730 232 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 KAT2AQ92830 837 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 TMBIM1Q969X1 311 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 ATP6V1G3Q96LB4 118 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 SPOCK3Q9BQ16 436 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 SIKE1Q9BRV8 207 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 DUSP26Q9BV47 211 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 C20orf27Q9GZN8 174 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 ACBD3Q9H3P7 528 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 PTGES2Q9H7Z7 377 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 MANSC1Q9H8J5 431 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 AKTIPQ9H8T0 292 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 CALHM2Q9HA72 323 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 SIRT3Q9NTG7 399 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 STOML1Q9UBI4 398 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 BTNL2Q9UIR0 455 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 FOXD3Q9UJU5 478 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 OR10H1Q9Y4A9 318 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 GMEB1Q9Y692 573 aa8.34□□□□□ -1.07
SMC1A-203ENST00000428014 NUP214P35658 2090 aaPredicted RBP8.34□□□□□ -1.07
SMC1A-203ENST00000428014 A0A087WZY1 265 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 A0A0G2JMM0 328 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 A0A1W2PPB8 328 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 A0A1W2PRS3 328 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 KIR3DP1A8MWS1 328 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 HNRNPRO43390 633 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms