RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 LAMP5Q9UJQ1 280 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCDHB10Q9UN67 800 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 EXO1Q9UQ84 846 aaKnown RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 CAMK2AQ9UQM7 478 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANGPT4Q9Y264 503 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPH3AQ9Y2J0 694 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM184BQ9Y519 407 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 DNMT3AQ9Y6K1 912 aaPredicted RBP5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCM1Q15154 2024 aa5.3□□□□□ -1.56
VTI1BP4-201ENST00000427516 FXYD6-FXYD2A0A087WZ82 144 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 A0A0U1RQF3 1178 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 C2orf92A0A1B0GVN3 265 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM72A0PK05 275 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 BTBD17A6NE02 478 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GGT3PA6NGU5 568 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACOD1A6NK06 481 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SEC14L6B5MCN3 397 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 C9JVG2 144 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 F5H423 210 aaPredicted RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF593O00488 134 aaPredicted RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARPC5O15511 151 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PRODHO43272 600 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 BCL2L11O43521 198 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR2T1O43869 369 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 UGDHO60701 494 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SH3BGRLO75368 114 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NDUFS6O75380 124 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NDUFS3O75489 264 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ECI2O75521 394 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPP40O75818 363 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARL6IP5O75915 188 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 RECQL4O94761 1208 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 F2P00734 622 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 JCHAINP01591 159 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FGF1P05230 155 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 URODP06132 367 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATXN1LP0C7T5 689 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 C1GALT1C1LP0DN25 315 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 BPIP17213 487 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 CXCL3P19876 107 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 AGAP20933 346 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 DDTP30046 118 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SSTR4P31391 388 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ADRA1AP35348 466 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 CEACAM6P40199 344 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NNMTP40261 264 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 KCNJ3P48549 501 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GZMMP51124 257 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GTF2A2P52657 109 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SMSP52788 366 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 STC1P52823 247 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 CDH12P55289 794 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FOXA1P55317 472 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 C21orf58P58505 322 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FKBP1AP62942 108 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GABREP78334 506 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 DLK1P80370 383 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 VLDLRP98155 873 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NHLH2Q02577 135 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACVR1Q04771 509 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ITKQ08881 620 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FABP9Q0Z7S8 132 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GAGE1Q13065 139 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAB33AQ14088 237 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TOMM34Q15785 309 aaPredicted RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 UGCGQ16739 394 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 HAGHQ16775 308 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ST3GAL2Q16842 350 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 MINDY4Q4G0A6 757 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SPANXN4Q5MJ08 99 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATAT1Q5SQI0 421 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM182AQ5T1J6 154 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SPOUT1Q5T280 376 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 HENMT1Q5T8I9 393 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATPAF1Q5TC12 328 aaPredicted RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 C12orf73Q69YU5 71 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 AWAT2Q6E213 333 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAB12Q6IQ22 244 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRNP1Q6NT89 227 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 DOK6Q6PKX4 331 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TPGS1Q6ZTW0 290 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRMT1LQ7Z2T5 733 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PLEKHH3Q7Z736 793 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 IQCHQ86VS3 1027 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PARGQ86W56 976 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF227Q86WZ6 799 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM131BQ86XD5 332 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 LDLRAD3Q86YD5 345 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 MARCH9Q86YJ5 346 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 DENND1CQ8IV53 801 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 SERPINA12Q8IW75 414 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 PUSL1Q8N0Z8 303 aaKnown RBP5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 LRRC52Q8N7C0 313 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF527Q8NB42 609 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 MFSD9Q8NBP5 474 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 NETO2Q8NC67 525 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 BEND2Q8NDZ0 799 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 GPRC5AQ8NFJ5 357 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR4C15Q8NGM1 316 aa5.29□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF461Q8TAF7 563 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms