RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TPRA1Q86W33 373 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 PTCHD1Q96NR3 888 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR10A5Q9H207 317 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR10A2Q9H208 303 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 NAV1Q8NEY1 1877 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 IL1R2P27930 398 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ACVR1BP36896 505 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TAS2R38P59533 333 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TAS2R19P59542 299 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 FAPQ12884 760 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 GPR50Q13585 617 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 DYRK1AQ13627 763 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 LRRC73Q5JTD7 316 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 LMX1AQ8TE12 382 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 PLEKHJ1Q9NW61 149 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF254O75437 659 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 CD1DP15813 335 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 KITLGP21583 273 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ECI1P42126 302 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 C7orf43Q8WVR3 580 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 MUL1Q969V5 352 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ANKRD60Q9BZ19 345 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 GMEB2Q9UKD1 530 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 B3GALT1Q9Y5Z6 326 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TYROBPO43914 113 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 RAB40ALP0C0E4 278 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 FGF3P11487 239 aaPredicted RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 HLA-EP13747 358 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 HBG1P69891 147 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 HBG2P69892 147 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 RBMS3Q6XE24 437 aaKnown RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 DPY19L4Q7Z388 723 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 PLXDC1Q8IUK5 500 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 RAB40AQ8WXH6 277 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR2M2Q96R28 347 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 AIG1Q9NVV5 245 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 CD300AQ9UGN4 299 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 SLC35F4A4IF30 521 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 GPM6BQ13491 265 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ELAVL3Q14576 367 aaKnown RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 KLRG2A4D1S0 409 aaPredicted RBP13.72□□□□□ -0.21
PTPN13-203ENST00000427191 CA12O43570 354 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 MC3RP41968 323 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR4D2P58180 307 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 PCBD1P61457 104 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 OR4C11Q6IEV9 310 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 CD300LGQ6UXG3 332 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 TTLL10Q6ZVT0 673 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 ASB17Q8WXJ9 295 aa13.72□□□□□ -0.21
PTPN13-203ENST00000427191 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 RAB3DO95716 219 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 PTHP01270 115 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 C8orf89P0DMQ9 161 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 PRKACGP22612 351 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 TSFMP43897 325 aaKnown RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 GRM2Q14416 872 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 FGFBP1Q14512 234 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 BATFQ16520 125 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM151AQ8N4L1 468 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 KCTD12Q96CX2 325 aaKnown RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 ELMOD3Q96FG2 381 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF486Q96H40 463 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 WDR92Q96MX6 357 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 POLE4Q9NR33 117 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 RHCGQ9UBD6 479 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 RNF225M0QZC1 329 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 TAP2Q03519 686 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 CYB5D2Q8WUJ1 264 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 MR1Q95460 341 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 FAM212BQ9NTI7 297 aaPredicted RBP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 A0A1W2PPV4 95 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 NDUFB2O95178 105 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 PCGF2P35227 344 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 POU3F4P49335 361 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 PCBP2Q15366 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
PTPN13-203ENST00000427191 C2orf76Q3KRA6 126 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 CCDC116Q8IYX3 515 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 CHTF18Q8WVB6 975 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 MFFQ9GZY8 342 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 SPDEFO95238 335 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM225BP0DP42 221 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 MITD1Q8WV92 249 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 KLK6Q92876 244 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 L3HYPDHQ96EM0 354 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 AMDHD1Q96NU7 426 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 GLTPD2A6NH11 291 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 APLNRP35414 380 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 SYPL2Q5VXT5 272 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 NAPRTQ6XQN6 538 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 ZFP82Q8N141 532 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 OR4K1Q8NGD4 311 aa13.71□□□□□ -0.21
PTPN13-203ENST00000427191 OR52N2Q8NGI0 321 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms