RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 PEX11AO75192 247 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 SLITRK5O94991 958 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 KCNH1O95259 989 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 SLU7O95391 586 aaKnown RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 CHRNGP07510 517 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 EFNA1P20827 205 aaPredicted RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 PSMD4P55036 377 aaKnown RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 DSCR4P56555 118 aaPredicted RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 RPL38P63173 70 aaKnown RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 FOXF2Q12947 444 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 ARL13AQ5H913 290 aaPredicted RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 POMZP3Q6PJE2 187 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 ZCCHC23Q6ZST2 131 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 P4HA3Q7Z4N8 544 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 TRABD2AQ86V40 505 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 EXOC3L1Q86VI1 746 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 UBQLNLQ8IYU4 475 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 OR2L13Q8N349 312 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 NUP43Q8NFH3 380 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 OR5M1Q8NGP8 315 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 CEP70Q8NHQ1 597 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 ZFP28Q8NHY6 868 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 TCP10LQ8TDR4 215 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 PIK3R3Q92569 461 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 SLC9A6Q92581 669 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 NRGNQ92686 78 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 CIDECQ96AQ7 238 aaPredicted RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 CHMP6Q96FZ7 201 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 METTL2AQ96IZ6 378 aaKnown RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 TRMOQ9BU70 441 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 MECRQ9BV79 373 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 POLDIP3Q9BY77 421 aaKnown RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 TBL1XR1Q9BZK7 514 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 TUBB1Q9H4B7 451 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 REEP4Q9H6H4 257 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 FLRT3Q9NZU0 649 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 CRIM1Q9NZV1 1036 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 GIMAP2Q9UG22 337 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.43□□□□□ -1.06
NUP50-206ENST00000422489 DNAJC15Q9Y5T4 150 aa8.43□□□□□ -1.06
NUP50-206ENST00000422489 V9GYY5 206 aaPredicted RBP8.43□□□□□ -1.06
NUP50-206ENST00000422489 MBD3L4A6NDZ8 208 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 MBD3L3A6NE82 208 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 TUBAL3A6NHL2 446 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 MBD3L5A6NJ08 208 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 TMEM233B4DJY2 109 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 PIP5K1BO14986 540 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 NPHS1O60500 1241 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 RCBTB2O95199 551 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 UTS2O95399 124 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 IL33O95760 270 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 FGF4P08620 206 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 NEFHP12036 1026 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 SDC1P18827 310 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 PRPH2P23942 346 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 EVI2BP34910 448 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 CPA2P48052 419 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 LHX2P50458 406 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 GAS1P54826 345 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 GFRA1P56159 465 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 VPS26BQ4G0F5 336 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 ZNF385BQ569K4 471 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 RAET1LQ5VY80 246 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 KANK2Q63ZY3 851 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 GALNT10Q86SR1 603 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 LUZP2Q86TE4 346 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 KIF18BQ86Y91 864 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 GRAMD2AQ8IUY3 354 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 GCNT2Q8N0V5 402 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 RIBC1Q8N443 379 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 GOT1L1Q8NHS2 421 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 MBD3L2Q8NHZ7 208 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 PPP1R14CQ8TAE6 165 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 LINC01560Q8TB33 94 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 FBXO30Q8TB52 745 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 TWIST2Q8WVJ9 160 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 WNT2BQ93097 391 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 ZBTB9Q96C00 473 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 RMND5BQ96G75 393 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 TM9SF2Q99805 663 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 CCT7Q99832 543 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 SH3GL2Q99962 352 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 GPATCH1Q9BRR8 931 aaKnown RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 LMF2Q9BU23 707 aaKnown RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 ROPN1BQ9BZX4 212 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 PTGES2Q9H7Z7 377 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 ROPN1Q9HAT0 212 aaPredicted RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 MRPS18CQ9Y3D5 142 aaKnown RBP8.42□□□□□ -1.06
NUP50-206ENST00000422489 ZNF337Q9Y3M9 751 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
NUP50-206ENST00000422489 A0A1W2PRB8 838 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 WDR91A4D1P6 747 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 TTC36A6NLP5 189 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 TMEM114B3SHH9 223 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 LSM1O15116 133 aaKnown RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 SEC14L5O43304 696 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 EMC8O43402 210 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 CTAG2O75638 210 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 ANGPTL1O95841 491 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms