RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 PDK1Q15118 436 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TBCCQ15814 346 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 BCL2A1Q16548 175 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 PDK4Q16654 411 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SMU1Q2TAY7 513 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GXYLT1Q4G148 440 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 KHDC1Q4VXA5 237 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 GJB7Q6PEY0 223 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 KIRREL2Q6UWL6 708 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 RANBP10Q6VN20 620 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SCARA5Q6ZMJ2 495 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 NLRP9Q7RTR0 991 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 NUDT13Q86X67 352 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 DENND6AQ8IWF6 608 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CNTN4Q8IWV2 1026 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 BBS5Q8N3I7 341 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TMEM86BQ8N661 226 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 RASGEF1AQ8N9B8 481 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF610Q8N9Z0 462 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 LPCAT1Q8NF37 534 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 OR11G2Q8NGC1 345 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF398Q8TD17 642 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 LRTOMTQ8WZ04 291 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SLC22A18Q96BI1 424 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MYEOVQ96EZ4 313 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CFAP57Q96MR6 1250 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 RPRD1AQ96P16 312 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 CBWD1Q9BRT8 395 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 UTP23Q9BRU9 249 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 BTBD10Q9BSF8 475 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 FGFBP2Q9BYJ0 223 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SDCBP2Q9H190 292 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SIX2Q9NPC8 291 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 FAIMQ9NVQ4 179 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 STX18Q9P2W9 335 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MBD2Q9UBB5 411 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 ANAPC5Q9UJX4 755 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 TBC1D30Q9Y2I9 924 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 HS3ST3B1Q9Y662 390 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 SONP18583 2426 aaKnown RBP3.36□□□□□ -1.87
CNGA1-203ENST00000420489 MYH11P35749 1972 aa3.36□□□□□ -1.87
CNGA1-203ENST00000420489 IQANK1A0A1B0GTG1 560 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 A0A1B0GVG6 124 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 SERTM2A0A1B0GWG4 89 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 A0A1W2PRV1 198 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 URADA6NGE7 173 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 AQP12BA6NM10 295 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 E7EQ34 232 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 F5H5T6 163 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 PGRMC2O15173 223 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 HOXA3O43365 443 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 EXOC3O60645 756 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 PFDN1O60925 122 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 CIB2O75838 187 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 KRT36O76013 467 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 PSMG1O95456 288 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 FTLP02792 175 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 TACSTD2P09758 323 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 FOLR1P15328 257 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 DDX5P17844 614 aaKnown RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ACADSBP45954 432 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 AVPR1BP47901 424 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 KCNJ1P48048 391 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 MARCKSL1P49006 195 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 TUBA4AP68366 448 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ARF5P84085 180 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 PMP22Q01453 160 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ASPHQ12797 758 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 RBBP7Q16576 425 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 RABGAP1LQ5R372 815 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ATPAF1Q5TC12 328 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 AADACL2Q6P093 401 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 C22orf39Q6P5X5 142 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ERICH5Q6P6B1 374 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 DPY19L3Q6ZPD9 716 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 Q6ZRM9 215 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 CLNKQ7Z7G1 428 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 PIGZQ86VD9 579 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 CHSY1Q86X52 802 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ZNF575Q86XF7 245 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 GPR150Q8NGU9 434 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 SLC9A6Q92581 669 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 MSI2Q96DH6 328 aaKnown RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 FAM120BQ96EK7 910 aaKnown RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ELMO2Q96JJ3 720 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 FAM111AQ96PZ2 611 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 SPATA16Q9BXB7 569 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 ULBP1Q9BZM6 244 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 TRABDQ9H4I3 376 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 LRRC19Q9H756 370 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 LRRC4Q9HBW1 653 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 SLCO1B3Q9NPD5 702 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 DDX28Q9NUL7 540 aaKnown RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 NDE1Q9NXR1 346 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 MRPL15Q9P015 296 aaKnown RBP3.35□□□□□ -1.87
CNGA1-203ENST00000420489 HESX1Q9UBX0 185 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 GAB2Q9UQC2 676 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 KLHL20Q9Y2M5 609 aa3.35□□□□□ -1.87
CNGA1-203ENST00000420489 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms