RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 C8orf59Q8N0T1 100 aaPredicted RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 SLC5A8Q8N695 610 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 ZNF615Q8N8J6 731 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 COX18Q8N8Q8 333 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 OR10G2Q8NGC3 310 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 GPR151Q8TDV0 419 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 RHBDD1Q8TEB9 315 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 PHF10Q8WUB8 498 aaKnown RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 PTPMT1Q8WUK0 201 aaPredicted RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 NMD3Q96D46 503 aaKnown RBP19.48■□□□□ 0.71
GPC1-202ENST00000420138 FEVQ99581 238 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 PSD2Q9BQI7 771 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 ERVK-19Q9WJR5 959 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 CEPT1Q9Y6K0 416 aa19.48■□□□□ 0.71
GPC1-202ENST00000420138 ITGAMP11215 1152 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 RPS4Y1P22090 263 aaKnown RBP19.47■□□□□ 0.71
GPC1-202ENST00000420138 SH3BGRP55822 239 aaPredicted RBP19.47■□□□□ 0.71
GPC1-202ENST00000420138 SPEM2Q0P670 501 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 MAPK14Q16539 360 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 ARHGAP40Q5TG30 622 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 CLIP4Q8N3C7 705 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 ATG16L2Q8NAA4 619 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 ZNF578Q96N58 590 aaPredicted RBP19.47■□□□□ 0.71
GPC1-202ENST00000420138 GFM1Q96RP9 751 aaKnown RBP19.47■□□□□ 0.71
GPC1-202ENST00000420138 PELOQ9BRX2 385 aaKnown RBP19.47■□□□□ 0.71
GPC1-202ENST00000420138 FUZQ9BT04 418 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 ING2Q9H160 280 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 SRPK3Q9UPE1 567 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 CACNA1HO95180 2353 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 GPR179Q6PRD1 2367 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 WDR87Q6ZQQ6 2873 aa19.47■□□□□ 0.71
GPC1-202ENST00000420138 TRBV4-1A0A0J9YWV2 114 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 AGAP5A6NIR3 686 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 CLDN24A6NM45 220 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 D6RAR5 112 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 H3BSA7 217 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 KIAA0513O60268 411 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 TPST2O60704 377 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 STX11O75558 287 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 LDOC1O95751 146 aaPredicted RBP19.46■□□□□ 0.71
GPC1-202ENST00000420138 IFNA16P05015 189 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 PIN1Q13526 163 aaPredicted RBP19.46■□□□□ 0.71
GPC1-202ENST00000420138 COLEC12Q5KU26 742 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ZNF770Q6IQ21 691 aaPredicted RBP19.46■□□□□ 0.71
GPC1-202ENST00000420138 PWWP2BQ6NUJ5 590 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 FIGNL1Q6PIW4 674 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 NPSR1Q6W5P4 371 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ZAR1Q86SH2 424 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ZFAND2BQ8WV99 257 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 CNPPD1Q9BV87 410 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ZNF443Q9Y2A4 671 aaPredicted RBP19.46■□□□□ 0.71
GPC1-202ENST00000420138 SLC9A8Q9Y2E8 581 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 LOC100130705A0A1B0GUX0 176 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 CDX4O14627 284 aaPredicted RBP19.46■□□□□ 0.71
GPC1-202ENST00000420138 BRINP1O60477 761 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 KCNK2O95069 426 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 AK1P00568 194 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 EPHA2P29317 976 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 HLCSP50747 726 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 PGDP52209 483 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ESRRGP62508 458 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 POU6F2P78424 691 aaPredicted RBP19.46■□□□□ 0.71
GPC1-202ENST00000420138 MINDY4Q4G0A6 757 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 B3GNT8Q7Z7M8 397 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 LAPTM4BQ86VI4 370 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ZNF619Q8N2I2 560 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ZSCAN1Q8NBB4 408 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 OR4N2Q8NGD1 307 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 OR9Q2Q8NGE9 314 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 C16orf52Q8NHV5 167 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 TMIGD2Q96BF3 282 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 ALPK1Q96QP1 1244 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 EDEM2Q9BV94 578 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 OR10A5Q9H207 317 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 VCX3AQ9NNX9 186 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 KRT84Q9NSB2 600 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 OCIAD1Q9NX40 245 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 PTTG2Q9NZH5 202 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 IFT52Q9Y366 437 aa19.46■□□□□ 0.71
GPC1-202ENST00000420138 TCRBV16S1A1N1A0A5B0 115 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 FRS3O43559 492 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 PRAMEF2O60811 474 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 RORAP35398 523 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 TPD52P55327 224 aaPredicted RBP19.45■□□□□ 0.7
GPC1-202ENST00000420138 EEF1A1P68104 462 aaKnown RBP19.45■□□□□ 0.7
GPC1-202ENST00000420138 ZFP36L1Q07352 338 aaKnown RBP19.45■□□□□ 0.7
GPC1-202ENST00000420138 GPR68Q15743 365 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 B3GNT6Q6ZMB0 384 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 ZNF836Q6ZNA1 936 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 ATOH1Q92858 354 aaPredicted RBP19.45■□□□□ 0.7
GPC1-202ENST00000420138 NIPSNAP1Q9BPW8 284 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 APMAPQ9HDC9 416 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 RXFP3Q9NSD7 469 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 MAN2C1Q9NTJ4 1040 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 CTSFQ9UBX1 484 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 FTSJ1Q9UET6 329 aa19.45■□□□□ 0.7
GPC1-202ENST00000420138 ASCC3Q8N3C0 2202 aaKnown RBP19.44■□□□□ 0.7
GPC1-202ENST00000420138 ARRDC5A6NEK1 342 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 C17orf105B2RV13 164 aa19.44■□□□□ 0.7
GPC1-202ENST00000420138 IGKV1D-16P01601 117 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms