RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SNX4O95219 450 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 UQCRC2P22695 453 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 IL12BP29460 328 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 GABRA3P34903 492 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 CDKN2CP42773 168 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 SQLEQ14534 574 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 DECR1Q16698 335 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.07■□□□□ 0.32
PTCD3-204ENST00000418628 KRTCAP3Q53RY4 240 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 SLC30A6Q6NXT4 461 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 BLOC1S3Q6QNY0 202 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 TMEM251Q8N6I4 163 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 FBXO30Q8TB52 745 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 NEURL3Q96EH8 262 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 RMND5BQ96G75 393 aaPredicted RBP17.07■□□□□ 0.32
PTCD3-204ENST00000418628 ZNF597Q96LX8 424 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 DOCK7Q96N67 2140 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 INPP5KQ9BT40 448 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 DOHHQ9BU89 302 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 OSBPL11Q9BXB4 747 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 ZFP64Q9NPA5 681 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 BOKQ9UMX3 212 aaPredicted RBP17.07■□□□□ 0.32
PTCD3-204ENST00000418628 VPS4AQ9UN37 437 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 ABCG2Q9UNQ0 655 aa17.07■□□□□ 0.32
PTCD3-204ENST00000418628 A0A0G2JND7 137 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 B4DXG7 233 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 TFECO14948 347 aaPredicted RBP17.06■□□□□ 0.32
PTCD3-204ENST00000418628 SNPHO15079 494 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 HS6ST1O60243 411 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 FADS1O60427 444 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 ICOSLGO75144 302 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 SOX30O94993 753 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 KCNK2O95069 426 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 IGHG3P01860 377 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 NGFRP08138 427 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 KRT16P08779 473 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 ALOX5P09917 674 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 SOAT1P35610 550 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 STX1BP61266 288 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 KCNJ2P63252 427 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 TIGD2Q4W5G0 525 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 BHLHB9Q6PI77 547 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 C6orf120Q7Z4R8 191 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 SLC22A16Q86VW1 577 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 CLEC4FQ8N1N0 589 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 FAM109AQ8N4B1 249 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 OR52N2Q8NGI0 321 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 GPR151Q8TDV0 419 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 SLC9A6Q92581 669 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 TMCO6Q96DC7 493 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 PHF12Q96QT6 1004 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 YIPF4Q9BSR8 244 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 TMEM120AQ9BXJ8 343 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 TSPAN10Q9H1Z9 355 aaPredicted RBP17.06■□□□□ 0.32
PTCD3-204ENST00000418628 SLC6A13Q9NSD5 602 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 QPCTLQ9NXS2 382 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 FLRT3Q9NZU0 649 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 PCDHGB4Q9UN71 923 aa17.06■□□□□ 0.32
PTCD3-204ENST00000418628 MPDZO75970 2070 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 NPIPA5E9PKD4 350 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 ACOT7O00154 380 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 ASNA1O43681 348 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 KCNH1O95259 989 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 C1QCP02747 245 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 RFPL3SP0C7P2 107 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 ZCCHC18P0CG32 403 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 TROVE2P10155 538 aaKnown RBP eCLIP17.05■□□□□ 0.32
PTCD3-204ENST00000418628 CD1EP15812 388 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 LCN1P31025 176 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 EVI2BP34910 448 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 KRT20P35900 424 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 PSMD4P55036 377 aaKnown RBP17.05■□□□□ 0.32
PTCD3-204ENST00000418628 SPDYE7PQ495Y7 208 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 METTL21CQ5VZV1 264 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 FGD2Q7Z6J4 655 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 ZAR1Q86SH2 424 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 COX18Q8N8Q8 333 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 CDS1Q92903 461 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 VPS33AQ96AX1 596 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 OTUB1Q96FW1 271 aaPredicted RBP17.05■□□□□ 0.32
PTCD3-204ENST00000418628 SLC35G5Q96KT7 338 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 OR7D2Q96RA2 312 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 METTL7AQ9H8H3 244 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 GALNT9Q9HCQ5 603 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 SEC14L3Q9UDX4 400 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 MRTO4Q9UKD2 239 aaKnown RBP17.05■□□□□ 0.32
PTCD3-204ENST00000418628 NPIPA1Q9UND3 350 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 ZNF835Q9Y2P0 537 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 WIF1Q9Y5W5 379 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 KCNE3Q9Y6H6 103 aa17.05■□□□□ 0.32
PTCD3-204ENST00000418628 FAM166BA8MTA8 275 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 UNC5CO95185 931 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 CPSF4O95639 269 aaKnown RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 VIMP08670 466 aaKnown RBP17.04■□□□□ 0.32
PTCD3-204ENST00000418628 CAPN3P20807 821 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 MAGEA5P43359 124 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 MVDP53602 400 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 KCNK10P57789 538 aa17.04■□□□□ 0.32
PTCD3-204ENST00000418628 RPS26P62854 115 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms