RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CAPN3P20807 821 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 UQCRC2P22695 453 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 CHI3L1P36222 383 aaPredicted RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 PTGDSP41222 190 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 MASP1P48740 699 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 ARFIP2P53365 341 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 PNLIPRP2P54317 469 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 CASP9P55211 416 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 KCNK10P57789 538 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 PPIAP62937 165 aaKnown RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 LRRC74AQ0VAA2 488 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 EFR3AQ14156 821 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 GTDC1Q4AE62 458 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 AGKQ53H12 422 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 SAXO2Q658L1 398 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 BHLHB9Q6PI77 547 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 FIGNL1Q6PIW4 674 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 SLC2A7Q6PXP3 512 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 MSANTD1Q6ZTZ1 278 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 C6orf120Q7Z4R8 191 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 ZAR1Q86SH2 424 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 TMEM251Q8N6I4 163 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 GOT1L1Q8NHS2 421 aaPredicted RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 TMCO6Q96DC7 493 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 GPR137Q96N19 417 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 OR7D2Q96RA2 312 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 STACQ99469 402 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 ANGPTL4Q9BY76 406 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 PIGUQ9H490 435 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 ZNF703Q9H7S9 590 aaPredicted RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 IL1RL2Q9HB29 575 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 DUSP22Q9NRW4 184 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 MRTO4Q9UKD2 239 aaKnown RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 BOKQ9UMX3 212 aaPredicted RBP11.43□□□□□ -0.58
SKA1-203ENST00000417656 TRIM33Q9UPN9 1127 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 HRH3Q9Y5N1 445 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 KCNE3Q9Y6H6 103 aa11.43□□□□□ -0.58
SKA1-203ENST00000417656 NBASA2RRP1 2371 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 ANKRD33BA6NCL7 494 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 ANKUB1A6NFN9 424 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 CCDC154A6NI56 674 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 GNB5O14775 395 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 TRIM3O75382 744 aaPredicted RBP11.42□□□□□ -0.58
SKA1-203ENST00000417656 KCNK2O95069 426 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 UNC5CO95185 931 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 EVI2BP34910 448 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 MAGEA5P43359 124 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 MAN2A2P49641 1150 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 IRX1P78414 480 aaPredicted RBP11.42□□□□□ -0.58
SKA1-203ENST00000417656 POU6F2P78424 691 aaPredicted RBP11.42□□□□□ -0.58
SKA1-203ENST00000417656 HSF1Q00613 529 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 CMPK2Q5EBM0 449 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 C6orf10Q5SRN2 563 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 TNFAIP8L2Q6P589 184 aaPredicted RBP11.42□□□□□ -0.58
SKA1-203ENST00000417656 TMEM81Q6P7N7 255 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 BLOC1S3Q6QNY0 202 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 ANGPTL8Q6UXH0 198 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 GFRALQ6UXV0 394 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 SLC22A16Q86VW1 577 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 OR52N2Q8NGI0 321 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 PNPT1Q8TCS8 783 aaKnown RBP11.42□□□□□ -0.58
SKA1-203ENST00000417656 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 RNF138Q8WVD3 245 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 C10orf82Q8WW14 230 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 SPDL1Q96EA4 605 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 NEURL3Q96EH8 262 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 TMEM41AQ96HV5 264 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 ITCHQ96J02 903 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 BTBD2Q9BX70 525 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 OR51I1Q9H343 314 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 RMND5AQ9H871 391 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 ZFP64Q9NPA5 681 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 SLC6A13Q9NSD5 602 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 FBXO34Q9NWN3 711 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 PLA2G2EQ9NZK7 142 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 SEC14L3Q9UDX4 400 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 LIPGQ9Y5X9 500 aa11.42□□□□□ -0.58
SKA1-203ENST00000417656 SVILO95425 2214 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 PRRC2CQ9Y520 2896 aaKnown RBP11.41□□□□□ -0.58
SKA1-203ENST00000417656 C17orf51A8MQB3 221 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 CDC40O60508 579 aaKnown RBP eCLIP11.41□□□□□ -0.58
SKA1-203ENST00000417656 SNX4O95219 450 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 WISP1O95388 367 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 UTS2O95399 124 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 CBX6O95503 412 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 ANP32DO95626 131 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 CELA3AP09093 270 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 RFPL3SP0C7P2 107 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 MATN1P21941 496 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 LSP1P33241 339 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 KHKP50053 298 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 SEC24CP53992 1094 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 PSMD4P55036 377 aaKnown RBP11.41□□□□□ -0.58
SKA1-203ENST00000417656 GNGT1P63211 74 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 STX5Q13190 355 aa11.41□□□□□ -0.58
SKA1-203ENST00000417656 ELOAQ14241 798 aaKnown RBP11.41□□□□□ -0.58
SKA1-203ENST00000417656 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms