RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PRKAA2P54646 552 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 BTKQ06187 659 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 WHAMMP3Q1A5X7 153 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 SHEQ5VZ18 495 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 OR2A2Q6IF42 318 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 ZNF474Q6S9Z5 364 aaPredicted RBP13.38□□□□□ -0.27
RPS28-201ENST00000417088 Q71RC1 249 aaPredicted RBP13.38□□□□□ -0.27
RPS28-201ENST00000417088 CHMP1BQ7LBR1 199 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 BTLAQ7Z6A9 289 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 UBQLNLQ8IYU4 475 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 CNEP1R1Q8N9A8 125 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 FIG4Q92562 907 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 WFIKKN1Q96NZ8 548 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 BBS4Q96RK4 519 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 KCNA7Q96RP8 456 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 RTN4RQ9BZR6 473 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 SIRT5Q9NXA8 310 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
RPS28-201ENST00000417088 SENP1Q9P0U3 644 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 PPP4R1LQ9P1A2 415 aa13.38□□□□□ -0.27
RPS28-201ENST00000417088 EXOC1LA0A1B0GW35 172 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 SERTM1A2A2V5 107 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 DEFB108AA8MXU0 73 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 H0YC42 278 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 COQ9O75208 318 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 ENO1P06733 434 aaKnown RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 ANXA4P09525 319 aaPredicted RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 HK1P19367 917 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 DDCP20711 480 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 ADSLP30566 484 aaPredicted RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 CD79BP40259 229 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 KIR2DL2P43627 348 aaPredicted RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 SUCLG1P53597 346 aaKnown RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 TPD52P55327 224 aaPredicted RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 PKNOX1P55347 436 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 C2orf80Q0P641 193 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 ZNF155Q12901 538 aaPredicted RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 LCP2Q13094 533 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 CYP27C1Q4G0S4 372 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 SH2D4BQ5SQS7 431 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 LGSNQ5TDP6 509 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 MEIOBQ8N635 442 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 L3HYPDHQ96EM0 354 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 SHCBP1LQ9BZQ2 653 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 OPN3Q9H1Y3 402 aaPredicted RBP13.37□□□□□ -0.27
RPS28-201ENST00000417088 KLHL28Q9NXS3 571 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 FLRT3Q9NZU0 649 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 MED11Q9P086 117 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 NFU1Q9UMS0 254 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 STK38LQ9Y2H1 464 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 ZNF337Q9Y3M9 751 aa13.37□□□□□ -0.27
RPS28-201ENST00000417088 A0A087WV62 115 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 TNFRSF21O75509 655 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 PSMG1O95456 288 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 CGAP01215 116 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 JUNP05412 331 aaKnown RBP13.36□□□□□ -0.27
RPS28-201ENST00000417088 MC3RP41968 323 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 GSTM5P46439 218 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 NCBP2P52298 156 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPS28-201ENST00000417088 SIRPAP78324 504 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 RAET1LQ5VY80 246 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 SLC22A9Q8IVM8 553 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 OR5M1Q8NGP8 315 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPS28-201ENST00000417088 PGM2Q96G03 612 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 GSTO2Q9H4Y5 243 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 SDHAF3Q9NRP4 125 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 TAS2R7Q9NYW3 318 aa13.36□□□□□ -0.27
RPS28-201ENST00000417088 C19orf53Q9UNZ5 99 aaPredicted RBP13.36□□□□□ -0.27
RPS28-201ENST00000417088 FN1P02751 2386 aaKnown RBP13.36□□□□□ -0.27
RPS28-201ENST00000417088 OR2M5A3KFT3 312 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 CCDC151A5D8V7 595 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 UPK1AO00322 258 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 UBFD1O14562 309 aaKnown RBP13.35□□□□□ -0.27
RPS28-201ENST00000417088 ABHD2P08910 425 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 CRYGSP22914 178 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 CCKARP32238 428 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 UGT2B10P36537 528 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 FOXA1P55317 472 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 CLDN20P56880 219 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 EEFSECP57772 596 aaKnown RBP13.35□□□□□ -0.27
RPS28-201ENST00000417088 ZNF763Q0D2J5 394 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 STX5Q13190 355 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 GANABQ14697 944 aaKnown RBP13.35□□□□□ -0.27
RPS28-201ENST00000417088 SPDYAQ5MJ70 313 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 FAM71E1Q6IPT2 247 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 TMEM107Q6UX40 140 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 CLEC9AQ6UXN8 241 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 MARCH3Q86UD3 253 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 OR2L13Q8N349 312 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 CDC26Q8NHZ8 85 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 DUSP19Q8WTR2 217 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 ZNF592Q92610 1267 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 PIK3IP1Q96FE7 263 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 ZNF845Q96IR2 970 aaPredicted RBP13.35□□□□□ -0.27
RPS28-201ENST00000417088 C16orf45Q96MC5 204 aaPredicted RBP13.35□□□□□ -0.27
RPS28-201ENST00000417088 PIP5K1AQ99755 562 aa13.35□□□□□ -0.27
RPS28-201ENST00000417088 MED18Q9BUE0 208 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms