RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 Q5BKY6 102 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 MRM1Q6IN84 353 aaKnown RBP13.79□□□□□ -0.2
LINC00475-202ENST00000416438 TMEM64Q6YI46 380 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 RASSF6Q6ZTQ3 369 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 MRGPREQ86SM8 312 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 DTX3Q8N9I9 347 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 ASCC1Q8N9N2 400 aaKnown RBP13.79□□□□□ -0.2
LINC00475-202ENST00000416438 GALNT6Q8NCL4 622 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 SPRYD4Q8WW59 207 aaPredicted RBP13.79□□□□□ -0.2
LINC00475-202ENST00000416438 SMG7Q92540 1137 aaKnown RBP13.79□□□□□ -0.2
LINC00475-202ENST00000416438 ELP4Q96EB1 424 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 FRMD6Q96NE9 622 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 MED18Q9BUE0 208 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 HDAC8Q9BY41 377 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 B3GAT2Q9NPZ5 323 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
LINC00475-202ENST00000416438 CLCA3PQ9Y6N3 262 aa13.79□□□□□ -0.2
LINC00475-202ENST00000416438 ZC3H12DA2A288 527 aaKnown RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 TTC36A6NLP5 189 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SNTNA6NMZ2 147 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SOCS6O14544 535 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 NFATC1O95644 943 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 HNRNPA1P09651 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SLC2A2P11168 524 aaPredicted RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 F3P13726 295 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 FUT1P19526 365 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ATP6V1E1P36543 226 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 RPS5P46782 204 aaKnown RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ST3GAL3Q11203 375 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 CDK10Q15131 360 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 AADACL4Q5VUY2 407 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SLC48A1Q6P1K1 146 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 BHLHB9Q6PI77 547 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 Q8N402 240 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 RAB42Q8N4Z0 105 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ENKURQ8TC29 256 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SLC35A4Q96G79 324 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ARHGDIGQ99819 225 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 PITHD1Q9GZP4 211 aaPredicted RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 CHD9Q3L8U1 2897 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 A0A1W2PP55 124 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 CDC42EP2O14613 210 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SURF4O15260 269 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 EMC8O43402 210 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 PEBP1P30086 187 aaKnown RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 IL18Q14116 193 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 GNA13Q14344 377 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 FAM214AQ32MH5 1076 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 TMEM35AQ53FP2 167 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 AGBL4Q5VU57 503 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 PPP2R2DQ66LE6 453 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 PLEKHM3Q6ZWE6 761 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 C16orf62Q7Z3J2 963 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 KLBQ86Z14 1044 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 OR4N5Q8IXE1 308 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 KCT2Q8NC54 265 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SLC16A11Q8NCK7 471 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 LILRB4Q8NHJ6 448 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 PIGXQ8TBF5 258 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 NACC2Q96BF6 587 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 SECISBP2Q96T21 854 aaKnown RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 MCHR1Q99705 422 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ATF6BQ99941 703 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ZNF649Q9BS31 505 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 TEX101Q9BY14 249 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 PPP1R3EQ9H7J1 279 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 ISG20L2Q9H9L3 353 aaKnown RBP13.78□□□□□ -0.2
LINC00475-202ENST00000416438 GIMAP4Q9NUV9 329 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 GPSM3Q9Y4H4 160 aa13.78□□□□□ -0.2
LINC00475-202ENST00000416438 CENPVL1A0A0U1RR11 272 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 GABRPO00591 440 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 HRO43593 1189 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 PSKH1P11801 424 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 PKLRP30613 574 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 FGF9P31371 208 aaPredicted RBP13.77□□□□□ -0.21
LINC00475-202ENST00000416438 MPIP34949 423 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 IFNGR2P38484 337 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 RGS8P57771 180 aaPredicted RBP13.77□□□□□ -0.21
LINC00475-202ENST00000416438 BTN3A2P78410 334 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 PRR5P85299 388 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 LRRC32Q14392 662 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 DUSP6Q16828 381 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 CD200R1LQ6Q8B3 271 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 FAM111BQ6SJ93 734 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 ARIH2OSQ8N7S6 290 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 OR2L5Q8NG80 312 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 OR2L3Q8NG85 312 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 NEIL3Q8TAT5 605 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 AP3S1Q92572 193 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 RNF170Q96K19 258 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 TBX5Q99593 518 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 SCN3AQ9NY46 2000 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 TRDV1A0A1B0GX56 115 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 ANKRD34BA5PLL1 514 aa13.77□□□□□ -0.21
LINC00475-202ENST00000416438 SEC14L5O43304 696 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms