RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 BBS4Q96RK4 519 aa13.53□□□□□ -0.24
SGCE-202ENST00000415788 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
SGCE-202ENST00000415788 ACSS1Q9NUB1 689 aaPredicted RBP13.53□□□□□ -0.24
SGCE-202ENST00000415788 RAXQ9Y2V3 346 aa13.53□□□□□ -0.24
SGCE-202ENST00000415788 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 A0A087WV48 116 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 MYO1GB0I1T2 1018 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 UPK1AO00322 258 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 KCNH1O95259 989 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 GSTT2P0CG29 244 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 GSTT2BP0CG30 244 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 ZNF24P17028 368 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 FEN1P39748 380 aaKnown RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 FRKP42685 505 aaPredicted RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 POLR2JP52435 117 aaKnown RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 RAD23AP54725 363 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 TPD52P55327 224 aaPredicted RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 TLE3Q04726 772 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 CHRNB3Q05901 458 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 SRSF6Q13247 344 aaKnown RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 SPCS2Q15005 226 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 OTUD3Q5T2D3 398 aaPredicted RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 ANXA8L1Q5VT79 327 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 CCDC81Q6ZN84 652 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 SLC16A12Q6ZSM3 486 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 MRGPREQ86SM8 312 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 ZDHHC13Q8IUH4 622 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 TMEM151BQ8IW70 566 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 DPP10Q8N608 796 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 OR11G2Q8NGC1 345 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 DAZLQ92904 295 aaKnown RBP13.52□□□□□ -0.25
SGCE-202ENST00000415788 TEX37Q96LM6 180 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 CGREF1Q99674 301 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 LPAR4Q99677 370 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 UGT2B28Q9BY64 529 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 PCDHGB1Q9Y5G3 927 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.25
SGCE-202ENST00000415788 IGHV1-45A0A0A0MS14 117 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 ASPDHA6ND91 283 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 GMNNO75496 209 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 SLITRK5O94991 958 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 LAMP1P11279 417 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 HOXB6P17509 224 aaKnown RBP13.51□□□□□ -0.25
SGCE-202ENST00000415788 LRRC74AQ0VAA2 488 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 IL18R1Q13478 541 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 AQP6Q13520 282 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 MLC1Q15049 377 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 NDUFA5Q16718 116 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 DGUOKQ16854 277 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 ZIK1Q3SY52 487 aaPredicted RBP13.51□□□□□ -0.25
SGCE-202ENST00000415788 FAM174BQ3ZCQ3 159 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 ZNF385BQ569K4 471 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 PAGE3Q5JUK9 113 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 NDUFAF7Q7L592 441 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 CHDHQ8NE62 594 aaPredicted RBP13.51□□□□□ -0.25
SGCE-202ENST00000415788 OR14A16Q8NHC5 309 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 ART5Q96L15 291 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 ZNF700Q9H0M5 742 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 PNO1Q9NRX1 252 aaKnown RBP13.51□□□□□ -0.25
SGCE-202ENST00000415788 FAM118AQ9NWS6 357 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
SGCE-202ENST00000415788 P4HTMQ9NXG6 502 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 CLCA3PQ9Y6N3 262 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 WDFY3Q8IZQ1 3526 aa13.51□□□□□ -0.25
SGCE-202ENST00000415788 CDC14CA4D256 554 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 SAGE2PA6NJ88 616 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 RNASET2O00584 256 aaKnown RBP13.5□□□□□ -0.25
SGCE-202ENST00000415788 EFSO43281 561 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 GABARAPO95166 117 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 PGRP06401 933 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 COX6A1P12074 109 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 TNNI3P19429 210 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 IL12AP29459 219 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 S100A3P33764 101 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 ZFP36L2P47974 494 aaKnown RBP13.5□□□□□ -0.25
SGCE-202ENST00000415788 NCBP2P52298 156 aaKnown RBP eCLIP13.5□□□□□ -0.251e-9■■□□□ 13.4
SGCE-202ENST00000415788 CDC20Q12834 499 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 SPANXN4Q5MJ08 99 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 STK32CQ86UX6 486 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 CCDC116Q8IYX3 515 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 CADM3Q8N126 398 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 RIT1Q92963 219 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 POP5Q969H6 163 aaKnown RBP13.5□□□□□ -0.25
SGCE-202ENST00000415788 ZNF566Q969W8 418 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 C8orf44Q96CB5 159 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 AMDHD1Q96NU7 426 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 RBM4BQ9BQ04 359 aaKnown RBP13.5□□□□□ -0.25
SGCE-202ENST00000415788 RBM4Q9BWF3 364 aaKnown RBP13.5□□□□□ -0.25
SGCE-202ENST00000415788 TOR3AQ9H497 397 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 DNAJB9Q9UBS3 223 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 NSG1A0A0A6YYJ2 146 aa13.5□□□□□ -0.25
SGCE-202ENST00000415788 ZNF99A8MXY4 864 aaPredicted RBP13.5□□□□□ -0.25
SGCE-202ENST00000415788 G3V2T6 193 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms