RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 UEVLDQ8IX04 471 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF101Q8IZC7 436 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 LSMEM2Q8N112 164 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF283Q8N7M2 679 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 OR10Q1Q8NGQ4 319 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 TMEM168Q9H0V1 697 aa11.27□□□□□ -0.6
PTPRF-205ENST00000414879 FBXO9Q9UK97 447 aaPredicted RBP11.27□□□□□ -0.6
PTPRF-205ENST00000414879 CITO14578 2027 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.61
PTPRF-205ENST00000414879 DNAJB6O75190 326 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 SLC35E2P0CK97 266 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 ITGAMP11215 1152 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 MYOGP15173 224 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 OTX2P32243 289 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 KCNJ5P48544 419 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 PYCR3Q53H96 274 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF554Q86TJ5 538 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 KMT5CQ86Y97 462 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 TMEM239Q8WW34 195 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 HSPBAP1Q96EW2 488 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 LRR1Q96L50 414 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 CCNL2Q96S94 520 aaPredicted RBP11.27□□□□□ -0.61
PTPRF-205ENST00000414879 CPPED1Q9BRF8 314 aaPredicted RBP11.27□□□□□ -0.61
PTPRF-205ENST00000414879 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 NME7Q9Y5B8 376 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 A0A0X1KG70 313 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 KLK8O60259 260 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 RPP14O95059 124 aaKnown RBP11.27□□□□□ -0.61
PTPRF-205ENST00000414879 RLN2P04090 185 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 FKBP2P26885 142 aaKnown RBP11.27□□□□□ -0.61
PTPRF-205ENST00000414879 HSD17B12Q53GQ0 312 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 PYHIN1Q6K0P9 492 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 TMEM64Q6YI46 380 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 TMEM184AQ6ZMB5 413 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 TOMM5Q8N4H5 51 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 NXPE2Q96DL1 559 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 BRD7Q9NPI1 651 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 TMEM30AQ9NV96 361 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 PPIL1Q9Y3C6 166 aa11.27□□□□□ -0.61
PTPRF-205ENST00000414879 KIAA0100Q14667 2235 aaKnown RBP11.27□□□□□ -0.61
PTPRF-205ENST00000414879 CCNKO75909 580 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CDRT1O95170 752 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 VNN2O95498 520 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CTGFP29279 349 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MALLQ13021 153 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ANKDD1AQ495B1 522 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 SLC35F1Q5T1Q4 408 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 TECPR1Q7Z6L1 1165 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CLEC1AQ8NC01 280 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MOCOSQ96EN8 888 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 C3orf30Q96M34 536 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 SLC46A1Q96NT5 459 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 OR1F2PQ96R84 312 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 SLC30A2Q9BRI3 323 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CUEDC1Q9NWM3 386 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 INTS6Q9UL03 887 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 A0A1W2PPL8 197 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 TSPAN11A1L157 253 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CLCA1A8K7I4 914 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF701M0R085 212 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CTNSO60931 367 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 SPARCP09486 303 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 RBM34P42696 430 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 STARP49675 285 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 GFOD2Q3B7J2 385 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 NRMQ8IXM6 262 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF100Q8IYN0 542 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 JAGN1Q8N5M9 183 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CHTF18Q8WVB6 975 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 OMA1Q96E52 524 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MGLLQ99685 303 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MED17Q9NVC6 651 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CNOT2Q9NZN8 540 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 PLEKHA6Q9Y2H5 1048 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 GRIP1Q9Y3R0 1128 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CMAHPQ9Y471 501 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MAGED1Q9Y5V3 778 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 TBX1O43435 398 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 FURINP09958 794 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF43P17038 809 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 HSD17B7P56937 341 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 DCDP81605 110 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 LKAAEAR1Q8TD35 194 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 RLN3Q8WXF3 142 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 CIDECQ96AQ7 238 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ZFP3Q96NJ6 502 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 OR7D2Q96RA2 312 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 URM1Q9BTM9 101 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 TMED9Q9BVK6 235 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MEPEQ9NQ76 525 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ERVK-19Q9WJR5 959 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 PTRH2Q9Y3E5 179 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 MYO18AQ92614 2054 aaKnown RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 OR5K3A6NET4 321 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 GJB3O75712 270 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 AIFM1O95831 613 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 HCKP08631 526 aa11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ZNF182P17025 639 aaPredicted RBP11.26□□□□□ -0.61
PTPRF-205ENST00000414879 ARNTP27540 789 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms