RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NUDT13Q86X67 352 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CRLF3Q8IUI8 442 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 SLC22A9Q8IVM8 553 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 RIBC1Q8N443 379 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 MREGQ8N565 214 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ZNF321PQ8N8H1 164 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 BANPQ8N9N5 519 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 Q8NA96 180 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 PLPP5Q8NEB5 264 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CATSPER1Q8NEC5 780 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 OR6Y1Q8NGX8 325 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CDC26Q8NHZ8 85 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 DNAJB14Q8TBM8 379 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 POC1BQ8TC44 478 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 METTL6Q8TCB7 284 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CPT1CQ8TCG5 803 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 AGR3Q8TD06 166 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 TCP10LQ8TDR4 215 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 AGAP11Q8TF27 550 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 PSMF1Q92530 271 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 PPWD1Q96BP3 646 aaKnown RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 REPS1Q96D71 796 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 L3HYPDHQ96EM0 354 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 C19orf60Q96EN9 201 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 VPS50Q96JG6 964 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 IMMP1LQ96LU5 166 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 COG8Q96MW5 612 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 AGAP4Q96P64 663 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 FRG2BQ96QU4 278 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 SMC6Q96SB8 1091 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ZNF382Q96SR6 550 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 SERPINI1Q99574 410 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 LPAR4Q99677 370 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 NPAS2Q99743 824 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 TUBB6Q9BUF5 446 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 GATA5Q9BWX5 397 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 NPLQ9BXD5 320 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 C1QTNF3Q9BXJ4 246 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 EBPLQ9BY08 206 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ZNF717Q9BY31 904 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 ILKAPQ9H0C8 392 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 LIN28AQ9H9Z2 209 aaKnown RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 TEX10Q9NXF1 929 aaPredicted RBP4.53□□□□□ -1.68
VPS41-205ENST00000414632 C5AR2Q9P296 337 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 GRID1Q9ULK0 1009 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 PLLPQ9Y342 182 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 ATG4BQ9Y4P1 393 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 CLDN16Q9Y5I7 305 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 PTGDR2Q9Y5Y4 395 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 RELNP78509 3460 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 SPTA1P02549 2419 aa4.53□□□□□ -1.68
VPS41-205ENST00000414632 IGKV3D-11A0A0A0MRZ8 115 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 A0A0A6YYD5 115 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 TRBV11-1A0A0K0K1C0 115 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 A0A1W2PQ72 361 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SAGE2PA6NJ88 616 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 PRSS47A8MTI9 375 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 C17orf105B2RV13 164 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 H0Y3Z8 333 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 J3KTA2 159 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CLDN4O14493 209 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 PGRMC2O15173 223 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LYPLA1O75608 230 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 SORBS2O94875 1100 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 WDPCPO95876 746 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 KRT6AP02538 564 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 KRT6BP04259 564 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SERPINA7P05543 415 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CHRNGP07510 517 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 FAM58BPP0C7Q3 252 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 NR2F6P10588 404 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 TNNI3P19429 210 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 IL10P22301 178 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SERPINB1P30740 379 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 HPDP32754 393 aaPredicted RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 KRT6CP48668 564 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 HSD17B7P56937 341 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LOXL3P58215 753 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LINC00310P59036 64 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 PMP22Q01453 160 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 FOLH1Q04609 750 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 MFAP5Q13361 173 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CUL3Q13618 768 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 RASA2Q15283 850 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SPDYAQ5MJ70 313 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 CCNYL2Q5T2Q4 361 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ABHD17BQ5VST6 288 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LIPMQ5VYY2 423 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ABLIM2Q6H8Q1 611 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 METTL2BQ6P1Q9 378 aaKnown RBP4.52□□□□□ -1.69
VPS41-205ENST00000414632 ISLR2Q6UXK2 745 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 COMMD6Q7Z4G1 85 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 GPR180Q86V85 440 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 EXOC3L1Q86VI1 746 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LCA5Q86VQ0 697 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ZNF595Q8IYB9 648 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 SPARTQ8N0X7 666 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 LGI4Q8N135 537 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 BEST3Q8N1M1 668 aa4.52□□□□□ -1.69
VPS41-205ENST00000414632 ZADH2Q8N4Q0 377 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms