RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 C17orf51A8MQB3 221 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 EMC8O43402 210 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 SCO2O43819 266 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 WDR1O75083 606 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 CBR3O75828 277 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 IL33O95760 270 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 EVI2BP34910 448 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 MAP3K8P41279 467 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 SLC18A1P54219 525 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 GAS1P54826 345 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 DIO3P55073 304 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 CRYZQ08257 329 aaKnown RBP13.5□□□□□ -0.25
LIMS4-201ENST00000413601 MLC1Q15049 377 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 SMU1Q2TAY7 513 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 C1orf185Q5T7R7 199 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 ACAD11Q709F0 780 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 PLCZ1Q86YW0 608 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 CCDC71Q8IV32 467 aaPredicted RBP13.5□□□□□ -0.25
LIMS4-201ENST00000413601 FBXO30Q8TB52 745 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 CA5BP1Q8WTZ4 195 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 RNF138Q8WVD3 245 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 SLC9A6Q92581 669 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 GIMAP5Q96F15 307 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 RMND5BQ96G75 393 aaPredicted RBP13.5□□□□□ -0.25
LIMS4-201ENST00000413601 MS4A4EQ96PG1 132 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 PRPF18Q99633 342 aaKnown RBP13.5□□□□□ -0.25
LIMS4-201ENST00000413601 TIMP4Q99727 224 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 TTYH2Q9BSA4 534 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 YIPF4Q9BSR8 244 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 ATAD3AQ9NVI7 634 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 ASIC5Q9NY37 505 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 FBXL2Q9UKC9 423 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 MRTO4Q9UKD2 239 aaKnown RBP13.5□□□□□ -0.25
LIMS4-201ENST00000413601 RNF6Q9Y252 685 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 SNX8Q9Y5X2 465 aa13.5□□□□□ -0.25
LIMS4-201ENST00000413601 TTC36A6NLP5 189 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 FADS1O60427 444 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 NKX2-2O95096 273 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 IGKV1D-16P01601 117 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 GLI4P10075 376 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 ACP2P11117 423 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 BMP7P18075 431 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 CLDN8P56748 225 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 PGS1Q32NB8 556 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 VPS26BQ4G0F5 336 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 VASNQ6EMK4 673 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 MFSD12Q6NUT3 480 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 GALNT10Q86SR1 603 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 KIRREL3Q8IZU9 778 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 CDRT4Q8N9R6 151 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 SLC16A11Q8NCK7 471 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 OR10Q1Q8NGQ4 319 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 OR5P2Q8WZ92 322 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 HOXB13Q92826 284 aaPredicted RBP13.49□□□□□ -0.25
LIMS4-201ENST00000413601 ARL8AQ96BM9 186 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 FAM120BQ96EK7 910 aaKnown RBP13.49□□□□□ -0.25
LIMS4-201ENST00000413601 OTUB1Q96FW1 271 aaPredicted RBP13.49□□□□□ -0.25
LIMS4-201ENST00000413601 C16orf58Q96GQ5 468 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 UGT2B28Q9BY64 529 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 MEAF6Q9HAF1 191 aa13.49□□□□□ -0.25
LIMS4-201ENST00000413601 ZCCHC3Q9NUD5 404 aaKnown RBP13.49□□□□□ -0.25
LIMS4-201ENST00000413601 DOCK7Q96N67 2140 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 B4DXG7 233 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 C19orf84I3L1E1 186 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 SNNO75324 88 aaPredicted RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 KCNH1O95259 989 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 C6orf47O95873 294 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 HOXD4P09016 255 aaPredicted RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 GABRA1P14867 456 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 CCT3P49368 545 aaKnown RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 PSMD4P55036 377 aaKnown RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 C21orf58P58505 322 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 PRR5P85299 388 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 DUSP5Q16690 384 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 LSM12Q3MHD2 195 aaKnown RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 NHSL2Q5HYW2 709 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 DCST1Q5T197 706 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 AGBL2Q5U5Z8 902 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 ULK2Q8IYT8 1036 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 NATD1Q8N6N6 113 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 OR14L1PQ8NHC6 308 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 ASB5Q8WWX0 329 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 JADE3Q92613 823 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 ABTB1Q969K4 478 aaPredicted RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 RTN4RQ9BZR6 473 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 BHLHE41Q9C0J9 482 aaPredicted RBP13.48□□□□□ -0.25
LIMS4-201ENST00000413601 OR2B2Q9GZK3 357 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 CXorf36Q9H7Y0 433 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 MANSC1Q9H8J5 431 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 CHST11Q9NPF2 352 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 THAP1Q9NVV9 213 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 PPP4R1LQ9P1A2 415 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 ABCG2Q9UNQ0 655 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 CAMK2AQ9UQM7 478 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 PCDHGB3Q9Y5G1 929 aa13.48□□□□□ -0.25
LIMS4-201ENST00000413601 CRYBG3Q68DQ2 2970 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms