RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ITCHQ96J02 903 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
CPNE1-206ENST00000412056 SLX1AQ9BQ83 275 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 DOHHQ9BU89 302 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 OR51I1Q9H343 314 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 PIGUQ9H490 435 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 RABEP2Q9H5N1 569 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 METTL7AQ9H8H3 244 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 AGPAT4Q9NRZ5 378 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 TMEM45AQ9NWC5 275 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 NBASA2RRP1 2371 aa12.79□□□□□ -0.36
CPNE1-206ENST00000412056 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 PRAMEF25A6NGN4 478 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 LRRC3CA6NJW4 275 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 FAM166BA8MTA8 275 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 ICOSLGO75144 302 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 KCNH1O95259 989 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 ANP32DO95626 131 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 MATN1P21941 496 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 PTPN6P29350 595 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 TDGF1P3P51864 188 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 FOXK1P85037 733 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 FOXO1Q12778 655 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 PAGE3Q5JUK9 113 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 TNFAIP8L2Q6P589 184 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-206ENST00000412056 TMEM81Q6P7N7 255 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 ANGPTL8Q6UXH0 198 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 SPATA21Q7Z572 469 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 RNF130Q86XS8 419 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 SIAH3Q8IW03 269 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 TRIML2Q8N7C3 387 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 POGLUT1Q8NBL1 392 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 NTNG2Q96CW9 530 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 TMCO6Q96DC7 493 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 JSRP1Q96MG2 331 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-206ENST00000412056 BTBD2Q9BX70 525 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 OSBPL11Q9BXB4 747 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 ANGPTL4Q9BY76 406 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 TTTY12Q9BZ98 90 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 PAIP1Q9H074 479 aaKnown RBP12.78□□□□□ -0.36
CPNE1-206ENST00000412056 NSRP1Q9H0G5 558 aaKnown RBP12.78□□□□□ -0.36
CPNE1-206ENST00000412056 GALNT9Q9HCQ5 603 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 SAR1AQ9NR31 198 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 FBXO34Q9NWN3 711 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 GIN1Q9NXP7 522 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 KLRF1Q9NZS2 232 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
CPNE1-206ENST00000412056 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
CPNE1-206ENST00000412056 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
CPNE1-206ENST00000412056 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 NPIPA5E9PKD4 350 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 TFECO14948 347 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 TRIM3O75382 744 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 UTS2O95399 124 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 ZCCHC18P0CG32 403 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 OR12D1P0DN82 309 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 HOXB9P17482 250 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 TRPC1P48995 793 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 KHKP50053 298 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 PSMD4P55036 377 aaKnown RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 KLF10Q13118 480 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 GRAMD1BQ3KR37 738 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 TBCELQ5QJ74 424 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 COX20Q5RI15 118 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 DCST2Q5T1A1 773 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 FAM110BQ8TC76 370 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 PNPT1Q8TCS8 783 aaKnown RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 ZFP90Q8TF47 636 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 RNF138Q8WVD3 245 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 RAB8BQ92930 207 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 AURKBQ96GD4 344 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 ZNF597Q96LX8 424 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 PHF12Q96QT6 1004 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 NMUR2Q9GZQ4 415 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 IL1RL2Q9HB29 575 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 BOKQ9UMX3 212 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-206ENST00000412056 NPIPA1Q9UND3 350 aa12.77□□□□□ -0.37
CPNE1-206ENST00000412056 ZNF462Q96JM2 2506 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 A0A096LPI6 279 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 NPIPA5A0A0B4J1W7 369 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 A0A1W2PP18 115 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 NPIPA7E9PJI5 369 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 ACOT7O00154 380 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 ADAM10O14672 748 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 GNB5O14775 395 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 SCO2O43819 266 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 HS6ST1O60243 411 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 SNX3O60493 162 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 GLSO94925 669 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-206ENST00000412056 RFPL3SP0C7P2 107 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 NPIPA8P0DM63 369 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 EVI2BP34910 448 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 UQCRFS1P47985 274 aa12.76□□□□□ -0.37
CPNE1-206ENST00000412056 PPIAP62937 165 aaKnown RBP12.76□□□□□ -0.37
CPNE1-206ENST00000412056 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms