RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CDC20BQ86Y33 519 aa13.37□□□□□ -0.27
CBX3-203ENST00000409747 TDRPQ86YL5 185 aa13.37□□□□□ -0.27
CBX3-203ENST00000409747 GRAMD2AQ8IUY3 354 aa13.37□□□□□ -0.27
CBX3-203ENST00000409747 OR2L13Q8N349 312 aa13.37□□□□□ -0.27
CBX3-203ENST00000409747 RBM24Q9BX46 236 aaKnown RBP13.37□□□□□ -0.27
CBX3-203ENST00000409747 C3orf14Q9HBI5 128 aa13.37□□□□□ -0.27
CBX3-203ENST00000409747 CCM2LQ9NUG4 571 aaPredicted RBP13.37□□□□□ -0.27
CBX3-203ENST00000409747 CLCF1Q9UBD9 225 aa13.37□□□□□ -0.27
CBX3-203ENST00000409747 SCO2O43819 266 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 NME6O75414 186 aaPredicted RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 PSMG1O95456 288 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 CLDN18P56856 261 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 EEFSECP57772 596 aaKnown RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 OR5M10Q6IEU7 315 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 OR2A2Q6IF42 318 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 GSPT2Q8IYD1 628 aaKnown RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 OR4N2Q8NGD1 307 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 INTS12Q96CB8 462 aaKnown RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 IQCGQ9H095 443 aaKnown RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 GLIPR2Q9H4G4 154 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 PTGES2Q9H7Z7 377 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 OXSMQ9NWU1 459 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 FAM120CQ9NX05 1096 aaKnown RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 RPH3AQ9Y2J0 694 aaPredicted RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 LINC01387J3KSC0 135 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 UPK1AO00322 258 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 SLC28A1O00337 649 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 COPEO14579 308 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 RGS14O43566 566 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 HCRTR2O43614 444 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 PEPDP12955 493 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 CPA3P15088 417 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 PRPH2P23942 346 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 STARP49675 285 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 FOXF2Q12947 444 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 LIPMQ5VYY2 423 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 SH2D5Q6ZV89 423 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 P4HA3Q7Z4N8 544 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 CAMKMTQ7Z624 323 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 LUZP2Q86TE4 346 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 MEIOBQ8N635 442 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 FADS6Q8N9I5 356 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 ELP4Q96EB1 424 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 ZNF764Q96H86 408 aaPredicted RBP13.36□□□□□ -0.27
CBX3-203ENST00000409747 AMDHD1Q96NU7 426 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 YIPF4Q9BSR8 244 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 G6PC3Q9BUM1 346 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 HHATLQ9HCP6 504 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 PACSIN3Q9UKS6 424 aa13.36□□□□□ -0.27
CBX3-203ENST00000409747 ITPR3Q14573 2671 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 NPIPB8E9PQR5 432 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 FADS1O60427 444 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 ZIC3O60481 467 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 SEC22BO75396 215 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 CRHP06850 196 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 NEFHP12036 1026 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 PAMR1Q6UXH9 720 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 GCNT2Q8N0V5 402 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 ZFP28Q8NHY6 868 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.35□□□□□ -0.277e-9■■■■■ 72.6
CBX3-203ENST00000409747 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 ALPK1Q96QP1 1244 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
CBX3-203ENST00000409747 TRMOQ9BU70 441 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 C1orf109Q9NX04 203 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 GALNT8Q9NY28 637 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 PLEKHA6Q9Y2H5 1048 aa13.35□□□□□ -0.27
CBX3-203ENST00000409747 PDPK1O15530 556 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 KCNH1O95259 989 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 IL33O95760 270 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 CHEK2O96017 543 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 SHBGP04278 402 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 KRT4P19013 534 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 TCEA1P23193 301 aaKnown RBP13.34□□□□□ -0.27
CBX3-203ENST00000409747 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 VPS26BQ4G0F5 336 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 RNF165Q6ZSG1 346 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 OR2M3Q8NG83 312 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 LINC01560Q8TB33 94 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 MBD6Q96DN6 1003 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 TRIM44Q96DX7 344 aaPredicted RBP13.34□□□□□ -0.27
CBX3-203ENST00000409747 CCT7Q99832 543 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 LIME1Q9H400 295 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 DSN1Q9H410 356 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 LRTM1Q9HBL6 345 aa13.34□□□□□ -0.27
CBX3-203ENST00000409747 SLC22A20A6NK97 555 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 SMIM23A6NLE4 172 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 RAF1P04049 648 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 CD99P14209 185 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 DDX5P17844 614 aaKnown RBP13.33□□□□□ -0.27
CBX3-203ENST00000409747 HK1P19367 917 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 GPC1P35052 558 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 B3GALT5-AS1P59052 145 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 STX5Q13190 355 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 TGIF2LYQ8IUE0 185 aa13.33□□□□□ -0.27
CBX3-203ENST00000409747 ZBED6CLQ96FA7 236 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms