RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 ANKRD27Q96NW4 1050 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 CPPED1Q9BRF8 314 aaPredicted RBP26.97■■□□□ 1.91
USP42-202ENST00000404008 HES7Q9BYE0 225 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 RAD21L1Q9H4I0 556 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 IKZF5Q9H5V7 419 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 PCDHGB6Q9Y5F9 930 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 FXYD1O00168 92 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 TP53I11O14683 189 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 CCL3P10147 92 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 PSMD4P55036 377 aaKnown RBP26.97■■□□□ 1.91
USP42-202ENST00000404008 CAPRIN1Q14444 709 aaKnown RBP26.97■■□□□ 1.91
USP42-202ENST00000404008 DCST2Q5T1A1 773 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 SLC25A25Q6KCM7 469 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 HEPHL1Q6MZM0 1159 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 FIGNL1Q6PIW4 674 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 XAGE5Q8WWM1 108 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 LRRC58Q96CX6 371 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 BBC3Q96PG8 261 aaPredicted RBP26.97■■□□□ 1.91
USP42-202ENST00000404008 EXD2Q9NVH0 621 aa26.97■■□□□ 1.91
USP42-202ENST00000404008 CHD6Q8TD26 2715 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 NME2P1O60361 137 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 ETFAP13804 333 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 NME2P22392 152 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 CRATP43155 626 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 RFX3P48380 749 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 KLRB1Q12918 225 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 EFR3AQ14156 821 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 RGNQ15493 299 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 CPEB4Q17RY0 729 aaKnown RBP eCLIP26.96■■□□□ 1.91
USP42-202ENST00000404008 PLEKHN1Q494U1 663 aaPredicted RBP26.96■■□□□ 1.91
USP42-202ENST00000404008 CCNJQ5T5M9 372 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 SLC22A10Q63ZE4 541 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 TEX19Q8NA77 164 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 CHDHQ8NE62 594 aaPredicted RBP26.96■■□□□ 1.91
USP42-202ENST00000404008 SPPL2AQ8TCT8 520 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 SECISBP2Q96T21 854 aaKnown RBP26.96■■□□□ 1.91
USP42-202ENST00000404008 SLC39A3Q9BRY0 314 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 KLHL1Q9NR64 748 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 FBXO34Q9NWN3 711 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 GID8Q9NWU2 228 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 CORO2BQ9UQ03 480 aa26.96■■□□□ 1.91
USP42-202ENST00000404008 PRRC2CQ9Y520 2896 aaKnown RBP26.95■■□□□ 1.9
USP42-202ENST00000404008 AIM2O14862 343 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 CYP4B1P13584 511 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 FADDQ13158 208 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 ARHGAP11BQ3KRB8 267 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 ATAD3BQ5T9A4 648 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 GALNT10Q86SR1 603 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 PTRH1Q86Y79 214 aaKnown RBP26.95■■□□□ 1.9
USP42-202ENST00000404008 FBXW8Q8N3Y1 598 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 TMEM178AQ8NBL3 297 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 G6PC3Q9BUM1 346 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 TRIM8Q9BZR9 551 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 EFCAB1Q9HAE3 211 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 SACM1LQ9NTJ5 587 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 ARL8BQ9NVJ2 186 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 CNIH4Q9P003 139 aa26.95■■□□□ 1.9
USP42-202ENST00000404008 CNOT11Q9UKZ1 510 aaKnown RBP26.95■■□□□ 1.9
USP42-202ENST00000404008 EVPLLA8MZ36 301 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 AK1P00568 194 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 RPP38P78345 283 aaKnown RBP26.94■■□□□ 1.9
USP42-202ENST00000404008 FUT5Q11128 374 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 KRT72Q14CN4 511 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 C16orf62Q7Z3J2 963 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 ZAR1Q86SH2 424 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 SLC39A7Q92504 469 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 ROPN1LQ96C74 230 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 TMCO6Q96DC7 493 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 NODALQ96S42 347 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 SDF2Q99470 211 aa26.94■■□□□ 1.9
USP42-202ENST00000404008 KLF13Q9Y2Y9 288 aaPredicted RBP26.94■■□□□ 1.9
USP42-202ENST00000404008 PRAMEF27A3QJZ7 478 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 P04436 131 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 GPX2P18283 190 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 MTPNP58546 118 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 DSTNP60981 165 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 SELPLGQ14242 412 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 NANOGP8Q6NSW7 305 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 TMEM81Q6P7N7 255 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 GALNTL5Q7Z4T8 443 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 C10orf111Q8N326 155 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 Q8NA96 180 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 NANOGQ9H9S0 305 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 TAGLN3Q9UI15 199 aa26.93■■□□□ 1.9
USP42-202ENST00000404008 HS6ST1O60243 411 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 ICOSLGO75144 302 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 BMP2P12643 396 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 RNF138Q8WVD3 245 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 DEPPQ9NTK1 212 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 THUMPD1Q9NXG2 353 aaKnown RBP26.92■■□□□ 1.9
USP42-202ENST00000404008 FLRT3Q9NZU0 649 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 LUZP4Q9P127 313 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 LIPT1Q9Y234 373 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 PCDHGA10Q9Y5H3 936 aa26.92■■□□□ 1.9
USP42-202ENST00000404008 ANKRD33BA6NCL7 494 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 TNFRSF21O75509 655 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 LCN1P31025 176 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 CASP3P42574 277 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 NUDT2P50583 147 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 PRAMEF20Q5VT98 475 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms