RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TFGQ92734 400 aaPredicted RBP18.59■□□□□ 0.57
CCDC47-202ENST00000403162 UCN3Q969E3 161 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 CAMK1GQ96NX5 476 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 MARVELD1Q9BSK0 173 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 PCBD2Q9H0N5 130 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 POLHQ9Y253 713 aa18.59■□□□□ 0.57
CCDC47-202ENST00000403162 A0A0G2JPF8 293 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 FAM240BA0A1B0GVZ2 78 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 HNRNPCL2B2RXH8 293 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 HNRNPCL3B7ZW38 293 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 SLC43A1O75387 559 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 LALBAP00709 142 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 HNRNPCL4P0DMR1 293 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 C6P13671 934 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 SOX18P35713 384 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 HSD17B2P37059 387 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 BUD31P41223 144 aaPredicted RBP18.58■□□□□ 0.57
CCDC47-202ENST00000403162 IL18Q14116 193 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 TMEM44Q2T9K0 475 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 TMEM64Q6YI46 380 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 SHFQ7M4L6 423 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 ZFP41Q8N8Y5 198 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 RFKQ969G6 155 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 CTPS2Q9NRF8 586 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 ASB4Q9Y574 426 aa18.58■□□□□ 0.57
CCDC47-202ENST00000403162 A0A0A6YYD5 115 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 FAM170BA6NMN3 283 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 ERVH48-1M5A8F1 160 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 ARHGEF9O43307 516 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 CHST10O43529 356 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 AKAP8O43823 692 aaKnown RBP18.58■□□□□ 0.56
CCDC47-202ENST00000403162 PRNPP04156 253 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 IL9P15248 144 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 C19orf57Q0VDD7 668 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 ZNF155Q12901 538 aaPredicted RBP18.58■□□□□ 0.56
CCDC47-202ENST00000403162 DSG2Q14126 1118 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 PRAMEF8Q5VWM4 474 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 PRAMEF7Q5VXH5 474 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 GLCCI1Q86VQ1 547 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 OR5K2Q8NHB8 316 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 UPRTQ96BW1 309 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 DCLRE1CQ96SD1 692 aaKnown RBP18.58■□□□□ 0.56
CCDC47-202ENST00000403162 SLC35C2Q9NQQ7 365 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 PRDM6Q9NQX0 595 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 ING3Q9NXR8 418 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 MALT1Q9UDY8 824 aa18.58■□□□□ 0.56
CCDC47-202ENST00000403162 PCYT1BQ9Y5K3 369 aaPredicted RBP18.58■□□□□ 0.56
CCDC47-202ENST00000403162 SYT5O00445 386 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 GABRPO00591 440 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 CPNE3O75131 537 aaKnown RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 KAT7O95251 611 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 CDH11P55287 796 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ST8SIA6P61647 398 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 WSCD2Q2TBF2 565 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 OR4C11Q6IEV9 310 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 TRILQ7L0X0 811 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 PRICKLE2Q7Z3G6 844 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 LHFPL3Q86UP9 236 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 MARCH9Q86YJ5 346 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 GJD3Q8N144 294 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 AMER3Q8N944 861 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 TP53I13Q8NBR0 393 aaPredicted RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 MAFAQ8NHW3 353 aaPredicted RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 NEIL3Q8TAT5 605 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 SFXN5Q8TD22 340 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 SENP5Q96HI0 755 aaPredicted RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 NRTNQ99748 197 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 DPH7Q9BTV6 452 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 GTPBP2Q9BX10 602 aaKnown RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 BTBD1Q9H0C5 482 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ASB6Q9NWX5 421 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 NLKQ9UBE8 527 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 PHF11Q9UIL8 331 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ADAM30Q9UKF2 790 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 TICRRQ7Z2Z1 1910 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 TCF20Q9UGU0 1960 aaKnown RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 H7BY64 318 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 APODP05090 189 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 NCBP2P52298 156 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 TAS2R41P59536 307 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ABATP80404 500 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 UAP1L1Q3KQV9 507 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 PUS10Q3MIT2 529 aaKnown RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 NDUFAF5Q5TEU4 345 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 AADACL4Q5VUY2 407 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 FAM46CQ5VWP2 391 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ABI3BPQ7Z7G0 1075 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 MEX3DQ86XN8 651 aaKnown RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 CADM2Q8N3J6 435 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 OR52N1Q8NH53 320 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 PRAP1Q96NZ9 151 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ZNF649Q9BS31 505 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 MENTQ9BUN1 341 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 TMED9Q9BVK6 235 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 LIPT1Q9Y234 373 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 EXOGQ9Y2C4 368 aaKnown RBP18.57■□□□□ 0.56
CCDC47-202ENST00000403162 CLCA3PQ9Y6N3 262 aa18.57■□□□□ 0.56
CCDC47-202ENST00000403162 ORC5O43913 435 aa18.56■□□□□ 0.56
CCDC47-202ENST00000403162 SLC19A2O60779 497 aa18.56■□□□□ 0.56
CCDC47-202ENST00000403162 RPN2P04844 631 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms