RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GPR34Q9UPC5 381 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 USP34Q70CQ2 3546 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 DAPL1A0PJW8 107 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 C12orf71A8MTZ7 269 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 LALBAP00709 142 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 S100A1P23297 94 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 DDX6P26196 483 aaKnown RBP eCLIP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 TRHRP34981 398 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 TALDO1P37837 337 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 CDC20Q12834 499 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 MLLT11Q13015 90 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF79Q15937 498 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 MEDAGQ5VYS4 303 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 KIF18BQ86Y91 864 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 SHISA5Q8N114 240 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 C10orf53Q8N6V4 93 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 ASCC1Q8N9N2 400 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 PIGKQ92643 395 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 RIPOR3Q96MK2 946 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 DCLRE1CQ96SD1 692 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 CTRCQ99895 268 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 KATNB1Q9BVA0 655 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 UCKL1Q9NWZ5 548 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 H0Y8X5 98 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 PRKNO60260 465 aaPredicted RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 GUCY1B2O75343 617 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 PRG2P13727 222 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 GDI1P31150 447 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 HYAL2Q12891 473 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 CST6Q15828 149 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 METRNLQ641Q3 311 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 FAM111BQ6SJ93 734 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 SAMD12Q8N8I0 201 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 CCL4L1Q8NHW4 92 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 SUN3Q8TAQ9 357 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 AP3S1Q92572 193 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 C19orf43Q9BQ61 176 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 CCDC32Q9BV29 185 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 FKBP14Q9NWM8 211 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 MRPL15Q9P015 296 aaKnown RBP11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 EXTL2Q9UBQ6 330 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
PPP4R1-202ENST00000400555 PRODHO43272 600 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 NDUFB5O43674 189 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 PAHP00439 452 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 CSF3P09919 207 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF888P0CJ79 500 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 HNRNPFP52597 415 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 KIAA1324Q6UXG2 1013 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 UBQLNLQ8IYU4 475 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 OR52L1Q8NGH7 329 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 OR2A1Q8NGT9 310 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 PCNPQ8WW12 178 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF717Q9BY31 904 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 PCBD2Q9H0N5 130 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 STON1Q9Y6Q2 735 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 PRKAR1AP10644 381 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 RFX2P48378 723 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 SNRPGP62308 76 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 MLF2Q15773 248 aaPredicted RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 RPTNQ6XPR3 784 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 LINC00299Q6ZSB3 139 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 KLHL36Q8N4N3 616 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 OTUB2Q96DC9 234 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 PRRC1Q96M27 445 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 SRMSQ9H3Y6 488 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 ISG20L2Q9H9L3 353 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 HSPB11Q9Y547 144 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 C17orf113A0A1B0GUU1 675 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 A0A1W2PRG6 482 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 GNRH1P01148 92 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 ATP5A1P25705 553 aaKnown RBP11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 CMPK1P30085 196 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 HCCSP53701 268 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 C21orf58P58505 322 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 IFITM2Q01629 132 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 PEX5LQ8IYB4 626 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 TOX2Q96NM4 488 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 SLC25A19Q9HC21 320 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 CABIN1Q9Y6J0 2220 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 THSD7BQ9C0I4 1608 aa11.87□□□□□ -0.51
PPP4R1-202ENST00000400555 C4orf51C9J302 202 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 UBXN7O94888 489 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 MAP2K3P46734 347 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 CCR4P51679 360 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 GNA13Q14344 377 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 EXOSC7Q15024 291 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 TATDN3Q17R31 274 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 ZNF433Q8N7K0 673 aaPredicted RBP11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 TMEM163Q8TC26 289 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 SLC41A3Q96GZ6 507 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 SRRQ9GZT4 340 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 MOV10Q9HCE1 1003 aaKnown RBP11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 TRAV27A0A087WT01 109 aa11.86□□□□□ -0.51
PPP4R1-202ENST00000400555 EMC8O43402 210 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms