RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 TM9SF1O15321 606 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 BIRC5O15392 142 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 AKAP10O43572 662 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 IL33O95760 270 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 PRPS2P11908 318 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 CPN1P15169 458 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 GRK2P25098 689 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 CEACAM8P31997 349 aaPredicted RBP13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 EVI2BP34910 448 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 GPC1P35052 558 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 TIMP3P35625 211 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 HPCAL1P37235 193 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 MAP3K8P41279 467 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 MANFP55145 182 aaKnown RBP13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 GAB1Q13480 694 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 MLC1Q15049 377 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 HSPB2Q16082 182 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 ATP6AP1LQ52LC2 224 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 TNFAIP8L3Q5GJ75 292 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 DCST1Q5T197 706 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 NSUN5P2Q63ZY6 315 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 ANKRD26P1Q6NSI1 321 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 SEM1Q6ZVN7 128 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 EXOC3L1Q86VI1 746 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 CEP70Q8NHQ1 597 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 CIDECQ96AQ7 238 aaPredicted RBP13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 WDYHV1Q96HA8 205 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 ZIM3Q96PE6 472 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 FAM120CQ9NX05 1096 aaKnown RBP13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 ATP6V1HQ9UI12 483 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 CAMK2AQ9UQM7 478 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 ACTL7BQ9Y614 415 aa13.53□□□□□ -0.24
SMIM11A-203ENST00000399299 SCAMP2O15127 329 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 FADS1O60427 444 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 LYPLA1O75608 230 aaPredicted RBP13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 NKX2-2O95096 273 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 SNUPNO95149 360 aaKnown RBP13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 DHRS4L1P0CG22 281 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 GFRA1P56159 465 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 VPS26BQ4G0F5 336 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 C6orf136Q5SQH8 315 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 ENPP6Q6UWR7 440 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 IFNEQ86WN2 208 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 LIX1LQ8IVB5 337 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 DMRTC2Q8IXT2 367 aaPredicted RBP13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 FADS6Q8N9I5 356 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 CDRT4Q8N9R6 151 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 OR14L1PQ8NHC6 308 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 ZPLD1Q8TCW7 415 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 PGM2Q96G03 612 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 C3orf30Q96M34 536 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 MS4A4EQ96PG1 132 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 SLC24A3Q9HC58 644 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 TAS2R10Q9NYW0 307 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 FBXL2Q9UKC9 423 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 DOCK7Q96N67 2140 aa13.52□□□□□ -0.25
SMIM11A-203ENST00000399299 KIAA1549Q9HCM3 1950 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 MBD3L4A6NDZ8 208 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 MBD3L3A6NE82 208 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 MBD3L5A6NJ08 208 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 EMC8O43402 210 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 PEX11AO75192 247 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 SKAP2O75563 359 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 KCNH1O95259 989 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 SERPINE1P05121 402 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 CHMP24386 653 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 DSCR4P56555 118 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 MAD2L1Q13257 205 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 RCAN2Q14206 197 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 SMU1Q2TAY7 513 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 AAGABQ6PD74 315 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 ZCCHC12Q6PEW1 402 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 WDR53Q7Z5U6 358 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 KIRREL3Q8IZU9 778 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 FNDC5Q8NAU1 212 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 NUP43Q8NFH3 380 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 OR4K17Q8NGC6 315 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 MBD3L2Q8NHZ7 208 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 PPP1R14CQ8TAE6 165 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 GIMAP5Q96F15 307 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 PKNOX2Q96KN3 472 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 LURAP1Q96LR2 239 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 CALHM2Q9HA72 323 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 EQTNQ9NQ60 294 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 SDHAF3Q9NRP4 125 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 ZNF629Q9UEG4 869 aaPredicted RBP13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 GIMAP2Q9UG22 337 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 DKKL1Q9UK85 242 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 CSMD2Q7Z408 3487 aa13.51□□□□□ -0.25
SMIM11A-203ENST00000399299 KDM4EB2RXH2 506 aaPredicted RBP13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 B4DXG7 233 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 DVL2O14641 736 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 SCO2O43819 266 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 ZWINTO95229 277 aa13.5□□□□□ -0.25
SMIM11A-203ENST00000399299 HSPA4LO95757 839 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms