RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HHEXQ03014 270 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MLLT11Q13015 90 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ITGADQ13349 1161 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ANKDD1AQ495B1 522 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC36A4Q6YBV0 504 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PLEKHM3Q6ZWE6 761 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MFSD4AQ8N468 514 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 GALNT6Q8NCL4 622 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FGF11Q92914 225 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CTHRC1Q96CG8 243 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CCDC3Q9BQI4 270 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TSSK6Q9BXA6 273 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FGF20Q9NP95 211 aaPredicted RBP16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CHCHD3Q9NX63 227 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TESQ9UGI8 421 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC6A14Q9UN76 642 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LSM2Q9Y333 95 aaKnown RBP16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PEX16Q9Y5Y5 336 aa16.54■□□□□ 0.24
HLA-DQB1-204ENST00000399084 FANCMQ8IYD8 2048 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PNMA8CA0A1B0GUJ8 204 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ISPDA4D126 451 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RAB36O95755 333 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SRFP11831 508 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PSMA1P25786 263 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 IDUAP35475 653 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OMPP47874 163 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 COPZ1P61923 177 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 EEF1A1P68104 462 aaKnown RBP16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MAP4K2Q12851 820 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 INAQ16352 499 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SNAPC1Q16533 368 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DUSP5Q16690 384 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SYT14P1Q58G82 188 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CA13Q8N1Q1 262 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SDR16C5Q8N3Y7 309 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC35B4Q969S0 331 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MROQ9BYG7 248 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DSN1Q9H410 356 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SEMA4GQ9NTN9 838 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 C14orf105Q9NVL8 296 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CHST2Q9Y4C5 530 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 UGT2A1Q9Y4X1 527 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TTC36A6NLP5 189 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 J3QRK9 145 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OCM2P0CE71 109 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OCMP0CE72 109 aaPredicted RBP16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ACP2P11117 423 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 NID1P14543 1247 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 S100A5P33763 92 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 BIKQ13323 160 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PRICKLE4Q2TBC4 344 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 RPL13AP3Q6NVV1 102 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ATCAYQ86WG3 371 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC34A3Q8N130 599 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZG16BQ96DA0 208 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SLC41A3Q96GZ6 507 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LRR1Q96L50 414 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DNAJC27Q9NZQ0 273 aa16.53■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TRAPPC13A5PLN9 417 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ARHGAP33O14559 1287 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MYL12BO14950 172 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 KLF4O43474 513 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PRKYO43930 277 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 TPST2O60704 377 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 UBXN7O94888 489 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 EIF2S1P05198 315 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 HSMCR30P0CW71 290 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MYL12AP19105 171 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 LSSP48449 732 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PRKCDQ05655 676 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 SMAD4Q13485 552 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ELOCQ15369 112 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MINDY4Q4G0A6 757 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 DCST2Q5T1A1 773 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ACSM5Q6NUN0 579 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 PRICKLE2Q7Z3G6 844 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CENPSQ8N2Z9 138 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CLIP4Q8N3C7 705 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZDHHC1Q8WTX9 485 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF578Q96N58 590 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 ZNF582Q96NG8 517 aaPredicted RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 OR5M11Q96RB7 305 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CHRNA10Q9GZZ6 450 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 QRSL1Q9H0R6 528 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 EVA1BQ9NVM1 165 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 CYP8B1Q9UNU6 501 aa16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 MRPS33Q9Y291 106 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 EXOSC1Q9Y3B2 195 aaKnown RBP16.52■□□□□ 0.24
HLA-DQB1-204ENST00000399084 A0A075B6Q4 140 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 TMEM129A0AVI4 362 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 CPSF4LA6NMK7 179 aaKnown RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 M0R129 80 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 KIAA0513O60268 411 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 ZIC2O95409 532 aaPredicted RBP16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 NT5EP21589 574 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 PTGER1P34995 402 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 AVPR1BP47901 424 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 FASLGP48023 281 aa16.51■□□□□ 0.23
HLA-DQB1-204ENST00000399084 FOXD4Q12950 439 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms