RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 MFSD12Q6NUT3 480 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CAMKMTQ7Z624 323 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CLECL1Q8IZS7 167 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 WDSUB1Q8N9V3 476 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR5AK3PQ8NH89 298 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CEP70Q8NHQ1 597 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RMND5BQ96G75 393 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PNPLA3Q9NST1 481 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SPRR3Q9UBC9 169 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PLEKHB1Q9UF11 243 aaPredicted RBP12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C15orf41Q9Y2V0 281 aa12.87□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NUP214P35658 2090 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 B4DXG7 233 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 C9JVG2 144 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SNPHO15079 494 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NKX2-2O95096 273 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PTPN6P29350 595 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CCT3P49368 545 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 UFM1P61960 85 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PSPHP78330 225 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PRR5P85299 388 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TP53BP2Q13625 1128 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EFR3AQ14156 821 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LASP1Q14847 261 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TOMM20Q15388 145 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DUSP5Q16690 384 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LSM12Q3MHD2 195 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ANKRD46Q86W74 232 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LRRC34Q8IZ02 419 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CLEC4FQ8N1N0 589 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CDRT4Q8N9R6 151 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PSMA8Q8TAA3 256 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NEIL3Q8TAT5 605 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ITLN2Q8WWU7 325 aaPredicted RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 JADE3Q92613 823 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MARK4Q96L34 752 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RTN4RQ9BZR6 473 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ACKR4Q9NPB9 350 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SERHLQ9NQF3 203 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ZNF446Q9NWS9 450 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SUCOQ9UBS9 1254 aaKnown RBP12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ACAD8Q9UKU7 415 aa12.86□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FREM3P0C091 2139 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR14I1A6ND48 311 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 E9PLN8 166 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLCO1B7G3V0H7 640 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 AQP7O14520 342 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SCO2O43819 266 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HCN1O60741 890 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SCN2BO60939 215 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KCNH1O95259 989 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 IL33O95760 270 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ELAVL4P26378 380 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 COL8A1P27658 744 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EVI2BP34910 448 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KIR3DL1P43629 444 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GAS1P54826 345 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PPP2R2AP63151 447 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SPDYE7PQ495Y7 208 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 VPS26BQ4G0F5 336 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EIPR1Q53HC9 387 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SPANXN4Q5MJ08 99 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FIGNL1Q6PIW4 674 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MRGPRGQ86SM5 289 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MARVELD2Q8N4S9 558 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NATD1Q8N6N6 113 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR8J2Q8NGG1 315 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LRRC8CQ8TDW0 803 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RNF138Q8WVD3 245 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DYDC1Q8WWB3 177 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TESCQ96BS2 214 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CHMP6Q96FZ7 201 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MAELQ96JY0 434 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 OR52B2Q96RD2 323 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DMRTA2Q96SC8 542 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 VKORC1Q9BQB6 163 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 AIG1Q9NVV5 245 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FBXO34Q9NWN3 711 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FBXL2Q9UKC9 423 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC6A5Q9Y345 797 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 WIF1Q9Y5W5 379 aa12.85□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FADS1O60427 444 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 DIAPH2O60879 1101 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HPNP05981 417 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GP1BBP13224 206 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 IL12AP29459 219 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SOAT1P35610 550 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CDSNQ15517 529 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FAM174BQ3ZCQ3 159 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 WIPI1Q5MNZ9 446 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 EXOSC6Q5RKV6 272 aaKnown RBP12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ZNF585AQ6P3V2 769 aa12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SPATA19Q7Z5L4 167 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms