RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 TESQ9UGI8 421 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 TMEM5Q9Y2B1 443 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 DYRK1BQ9Y463 629 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 CACNG2Q9Y698 323 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 DSPPQ9NZW4 1301 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 GBF1Q92538 1859 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 VCANP13611 3396 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 SOCS6O14544 535 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 SYN3O14994 580 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 IFNA7P01567 189 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 MRPL3P09001 348 aaKnown RBP9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 ACP2P11117 423 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 ICAM2P13598 275 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 HSD3B1P14060 373 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 GNSP15586 552 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC6A1P30531 599 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 TSPAN5P62079 268 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 PRR20EP86478 221 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 PRR20CP86479 221 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 PRR20DP86480 221 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 PRR20BP86481 221 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 PRR20AP86496 221 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 TPBGQ13641 420 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 SLC27A4Q6P1M0 643 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 TMEM220Q6QAJ8 160 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 SLCO4C1Q6ZQN7 724 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 HSD11B1LQ7Z5J1 315 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 ADGRF3Q8IZF5 1079 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 TOMM5Q8N4H5 51 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM26EQ8N5C1 309 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 COQ8AQ8NI60 647 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 GANCQ8TET4 914 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 ZNF480Q8WV37 535 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 LINC00052Q96N35 136 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 FOPNLQ96NB1 174 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 RANBP3Q9H6Z4 567 aaPredicted RBP9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 NANSQ9NR45 359 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 ADAM30Q9UKF2 790 aa9.28□□□□□ -0.92
PTCHD4-202ENST00000398738 TEX51A0A1B0GUA7 166 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 FAM170BA6NMN3 283 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 M0R233 179 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 PRODHO43272 600 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 TRIM3O75382 744 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 ERAL1O75616 437 aaKnown RBP9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 REM1O75628 298 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 TCRBP04435 133 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 AHRP35869 848 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 TAS2R41P59536 307 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 OC90Q02509 493 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 SPEM2Q0P670 501 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 STK11Q15831 433 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 HIST2H2AA3Q6FI13 130 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 RASSF6Q6ZTQ3 369 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 JAZF1Q86VZ6 243 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 DCAF4L2Q8NA75 395 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 TOR1AIP2Q8NFQ8 470 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 OR8D4Q8NGM9 314 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 CHD5Q8TDI0 1954 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 GIMAP1Q8WWP7 306 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 LINC01599Q8WXQ3 324 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 KIAA1143Q96AT1 154 aaPredicted RBP9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 FCRL1Q96LA6 429 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 POLDIP3Q9BY77 421 aaKnown RBP9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.27□□□□□ -0.926e-23■□□□□ 10.4
PTCHD4-202ENST00000398738 SLCO1C1Q9NYB5 712 aa9.27□□□□□ -0.92
PTCHD4-202ENST00000398738 FEZF1A0PJY2 475 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 LINC00862A6NCI5 91 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 PRR23AA6NEV1 266 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 SEC14L5O43304 696 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 ALDOBP05062 364 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 URODP06132 367 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 HOXC8P31273 242 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 DGCR2P98153 550 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 TMEM201Q5SNT2 666 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 RPTNQ6XPR3 784 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC36A4Q6YBV0 504 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF782Q6ZMW2 699 aaPredicted RBP9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 ADCK2Q7Z695 626 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 DDX53Q86TM3 631 aaKnown RBP9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 TRAPPC5Q8IUR0 188 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 SIAH3Q8IW03 269 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 MS4A15Q8N5U1 240 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 FBXW5Q969U6 566 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 GPR137Q96N19 417 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC38A2Q96QD8 506 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 RBP7Q96R05 134 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 DDOQ99489 341 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 MACROD1Q9BQ69 325 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 GSDMCQ9BYG8 508 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 DPAGT1Q9H3H5 408 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 MCCC2Q9HCC0 563 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 DMRT3Q9NQL9 472 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 A4GNTQ9UNA3 340 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 CHST2Q9Y4C5 530 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 OR51B4Q9Y5P0 310 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 A0A1W2PPL8 197 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 QSOX1O00391 747 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 PPM1DO15297 605 aa9.27□□□□□ -0.93
PTCHD4-202ENST00000398738 MAGEB4O15481 346 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms