RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 CPN1P15169 458 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 SDC1P18827 310 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 BMP5P22003 454 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 GRK2P25098 689 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 SRD5A2P31213 254 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 EVI2BP34910 448 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 WNT3P56703 355 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 HSPB3Q12988 150 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 MYBPHQ13203 477 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 DECR1Q16698 335 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 GALNTL6Q49A17 601 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 RFTN2Q52LD8 501 aaPredicted RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 DCST1Q5T197 706 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 CES4AQ5XG92 561 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 OR5M10Q6IEU7 315 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ANKRD26P1Q6NSI1 321 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF551Q7Z340 670 aaPredicted RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 TRIM42Q8IWZ5 723 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 NAXEQ8NCW5 288 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ZFP28Q8NHY6 868 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ZPLD1Q8TCW7 415 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 RNF138Q8WVD3 245 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ZBED6CLQ96FA7 236 aaPredicted RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 LRRC46Q96FV0 321 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF559Q9BR84 538 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 LMF2Q9BU23 707 aaKnown RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 CALHM2Q9HA72 323 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 SH3BP4Q9P0V3 963 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF629Q9UEG4 869 aaPredicted RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 KCNN3Q9UGI6 736 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 DKKL1Q9UK85 242 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 FBXL2Q9UKC9 423 aa12.19□□□□□ -0.46
VCX3A-202ENST00000398729 MRPS18CQ9Y3D5 142 aaKnown RBP12.19□□□□□ -0.46
VCX3A-202ENST00000398729 MBD3L4A6NDZ8 208 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 MBD3L3A6NE82 208 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 MBD3L5A6NJ08 208 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 KDM4EB2RXH2 506 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 TMEM233B4DJY2 109 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 AKAP10O43572 662 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 SCO2O43819 266 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 TBX19O60806 448 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 CD99P14209 185 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 DDX5P17844 614 aaKnown RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 SERPINB5P36952 375 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 PEX19P40855 299 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 ASMTP46597 345 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 GAS1P54826 345 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 PSMD4P55036 377 aaKnown RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 GAB1Q13480 694 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 UGT3A2Q3SY77 523 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 AAGABQ6PD74 315 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 OR4K17Q8NGC6 315 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 CLHC1Q8NHS4 586 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 MBD3L2Q8NHZ7 208 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 AGR3Q8TD06 166 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 NRGNQ92686 78 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 CIDECQ96AQ7 238 aaPredicted RBP12.18□□□□□ -0.46
VCX3A-202ENST00000398729 PPP3R2Q96LZ3 170 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 TMEM109Q9BVC6 243 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 C3orf14Q9HBI5 128 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 SDHAF3Q9NRP4 125 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 PPP4R1LQ9P1A2 415 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 BAIAP2L1Q9UHR4 511 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 JMJD1CQ15652 2540 aa12.18□□□□□ -0.46
VCX3A-202ENST00000398729 HRNRQ86YZ3 2850 aaPredicted RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 TMEM114B3SHH9 223 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 H0Y3Z8 333 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 SYT5O00445 386 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 IL33O95760 270 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 PRPS2P11908 318 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 DPP4P27487 766 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 MAPK1P28482 360 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 DNAJA1P31689 397 aaKnown RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 UQCRC1P31930 480 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 GABRA3P34903 492 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 RFX3P48380 749 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 CLK3P49761 638 aaKnown RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 ASCL1P50553 236 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF136P52737 540 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 MANFP55145 182 aaKnown RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 GFRA1P56159 465 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 DLX5P56178 289 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 DSCR4P56555 118 aaPredicted RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 SRYQ05066 204 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 PDE7AQ13946 482 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 ZNF385BQ569K4 471 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 ARSKQ6UWY0 536 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 R3HCC1LQ7Z5L2 792 aaKnown RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 MREGQ8N565 214 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 RELL2Q8NC24 303 aaPredicted RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 CEP70Q8NHQ1 597 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 MTERF3Q96E29 417 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 SFXN2Q96NB2 322 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 EQTNQ9NQ60 294 aa12.17□□□□□ -0.46
VCX3A-202ENST00000398729 ACSS1Q9NUB1 689 aaPredicted RBP12.17□□□□□ -0.46
VCX3A-202ENST00000398729 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms