RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ABCB7O75027 752 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 IL33O95760 270 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 SNRPB2P08579 225 aaKnown RBP23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 CASP3P42574 277 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 POU6F2P78424 691 aaPredicted RBP23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 MTDHQ86UE4 582 aaKnown RBP23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 ZFP90Q8TF47 636 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 RAB8BQ92930 207 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 FAM173AQ9BQD7 235 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 DOHHQ9BU89 302 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 GALNT9Q9HCQ5 603 aa23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 MRTO4Q9UKD2 239 aaKnown RBP23.27■■□□□ 1.32
TMEM55B-202ENST00000398020 C2orf72A6NCS6 295 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 ICOSLGO75144 302 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 ZCCHC18P0CG32 403 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 OR12D1P0DN82 309 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 EFR3AQ14156 821 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 RNFT1Q5M7Z0 435 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 COX20Q5RI15 118 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 ZAR1Q86SH2 424 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 TMCO6Q96DC7 493 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 SECISBP2Q96T21 854 aaKnown RBP23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 BTBD2Q9BX70 525 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 TSPAN10Q9H1Z9 355 aaPredicted RBP23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 TUBA8Q9NY65 449 aaPredicted RBP23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 KLRF1Q9NZS2 232 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 NDUFAF1Q9Y375 327 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 NINQ8N4C6 2090 aa23.26■■□□□ 1.31
TMEM55B-202ENST00000398020 A0A096LPI6 279 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 ANGPT2O15123 496 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 RPP38P78345 283 aaKnown RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 RETREG3Q86VR2 466 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 JSRP1Q96MG2 331 aaPredicted RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 PHF12Q96QT6 1004 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 GIN1Q9NXP7 522 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 SLC25A37Q9NYZ2 338 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 LEF1Q9UJU2 399 aaPredicted RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 CAPN7Q9Y6W3 813 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 HOXB9P17482 250 aaPredicted RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 PSMD4P55036 377 aaKnown RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 DCST2Q5T1A1 773 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 PIGWQ7Z7B1 504 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 MSRB3Q8IXL7 192 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 ZFP62Q8NB50 900 aaPredicted RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 FAM110BQ8TC76 370 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 MIPOL1Q8TD10 442 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 FAR1Q8WVX9 515 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 XAGE5Q8WWM1 108 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 CCT8L2Q96SF2 557 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 ANGPTL4Q9BY76 406 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 TPT1P8Q9HAU6 139 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 MRGBPQ9NV56 204 aa23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.25■■□□□ 1.31
TMEM55B-202ENST00000398020 NBASA2RRP1 2371 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 LOC100653049A0A140TA62 436 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 PRAMEF25A6NGN4 478 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 CCDC22O60826 627 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 KRT34O76011 436 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 WISP2O76076 250 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 KHKP50053 298 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 OLIG3Q7RTU3 272 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 ZNF605Q86T29 641 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 IL1RL2Q9HB29 575 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 OLAHQ9NV23 265 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 PCDHGB3Q9Y5G1 929 aa23.24■■□□□ 1.31
TMEM55B-202ENST00000398020 ANKRD33BA6NCL7 494 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 DUXAA6NLW8 204 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 FAM166BA8MTA8 275 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 HS6ST1O60243 411 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 SHOX2O60902 331 aaPredicted RBP23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 UTS2O95399 124 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 KRT75O95678 551 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 CRYABP02511 175 aaKnown RBP23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 ZNF24P17028 368 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 PTGDSP41222 190 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 PLGLB1Q02325 96 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 FOXO1Q12778 655 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 IGFBP7Q16270 282 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 LRIF1Q5T3J3 769 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 SNX32Q86XE0 403 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 TSPEARQ8WU66 669 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 OSBPL11Q9BXB4 747 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 TTTY12Q9BZ98 90 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 AGPAT4Q9NRZ5 378 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 VAPAQ9P0L0 249 aa23.23■■□□□ 1.31
TMEM55B-202ENST00000398020 HMGN4O00479 90 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 FBP2O00757 339 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 MST1P26927 711 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 MVDP53602 400 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 ALDH6A1Q02252 535 aaKnown RBP23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 TBCELQ5QJ74 424 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 G6PC3Q9BUM1 346 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 SHANK1Q9Y566 2161 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 C17orf51A8MQB3 221 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 PYCARD-AS1I3L0S3 204 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 CLIC1O00299 241 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 SCO2O43819 266 aa23.22■■□□□ 1.31
TMEM55B-202ENST00000398020 UNC5CO95185 931 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms