RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CDC14CA4D256 554 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PATE3B3GLJ2 98 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 M0R3H8 397 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 CTSVO60911 334 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SOX14O95416 240 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 HK1P19367 917 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 CD22P20273 847 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PER3P56645 1201 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 TPRG1LQ5T0D9 272 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SLC27A4Q6P1M0 643 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 DHRS13Q6UX07 377 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 NAXDQ8IW45 347 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SLC22A18ASQ8N1D0 253 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PROKR2Q8NFJ6 384 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 OR4K5Q8NGD3 323 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 OR2AJ1Q8NGZ0 328 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SNIP1Q8TAD8 396 aaKnown RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SLC38A5Q8WUX1 472 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 NAA11Q9BSU3 229 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 COPS4Q9BT78 406 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 YTHDF1Q9BYJ9 559 aaKnown RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 FAM192AQ9GZU8 254 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 MCCC2Q9HCC0 563 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 FSCN3Q9NQT6 498 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 DUSP22Q9NRW4 184 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF225Q9UK10 706 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PCDHGA8Q9Y5G5 932 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 UNC119BA6NIH7 251 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 HCRTR1O43613 425 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ASNA1O43681 348 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ADAP00813 363 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 TRHRP34981 398 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SSR4P51571 173 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 COX10Q12887 443 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SELPLGQ14242 412 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF750Q32MQ0 723 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 KLHL26Q53HC5 615 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 VWA2Q5GFL6 755 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF425Q6IV72 752 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 GALNT6Q8NCL4 622 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 OR2T33Q8NG76 320 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 DDIT4LQ96D03 193 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 STACQ99469 402 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 POLDIP3Q9BY77 421 aaKnown RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 TOR3AQ9H497 397 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 TMEM38AQ9H6F2 299 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 RASAL1O95294 804 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 C8BP07358 591 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SSTR4P31391 388 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 CPOXP36551 454 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 STT3AP46977 705 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 CHRNEQ04844 493 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 DYNC1I2Q13409 638 aaKnown RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PDZK1Q5T2W1 519 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 MISPQ8IVT2 679 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 OR10H4Q8NGA5 316 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 A4GALTQ9NPC4 353 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PILRBQ9UKJ0 227 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 A0A0A6YYD5 115 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 NUDT7P0C024 238 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 CD46P15529 392 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 HTR3AP46098 478 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 RGS19P49795 217 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 OR2B6P58173 313 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 RELAQ04206 551 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ITGADQ13349 1161 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 RUNX2Q13950 521 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 TBC1D25Q3MII6 688 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 IL20RBQ6UXL0 311 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 MAMDC2Q7Z304 686 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 DEFB124Q8NES8 71 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 OR51A7Q8NH64 312 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PRRC1Q96M27 445 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 PRDM7Q9NQW5 492 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 SSR3Q9UNL2 185 aa7.73□□□□□ -1.17
PTPRD-204ENST00000397606 ZNF443Q9Y2A4 671 aaPredicted RBP7.73□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA5A0A0B4J1W7 369 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 SMIM31A0A1B0GVY4 71 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA7E9PJI5 369 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 TLX2O43763 284 aaPredicted RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 OR2T1O43869 369 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PRAMEF10O60809 474 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 EML2O95834 649 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA8P0DM63 369 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 BMP2P12643 396 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PNLIPP16233 465 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 GINS1Q14691 196 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 GPAT4Q86UL3 456 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 ADGRG5Q8IZF4 528 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 KBTBD8Q8NFY9 601 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PMM1Q92871 262 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 KCNS3Q9BQ31 491 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 UTP23Q9BRU9 249 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 LMF2Q9BU23 707 aaKnown RBP7.72□□□□□ -1.17
PTPRD-204ENST00000397606 SEMA4GQ9NTN9 838 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 DAPL1A0PJW8 107 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA2E9PIF3 369 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 NPIPA3F8WFD2 350 aa7.72□□□□□ -1.17
PTPRD-204ENST00000397606 PCDH17O14917 1159 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms