RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 OR7G2Q8NG99 324 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 TEX101Q9BY14 249 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 TPSD1Q9BZJ3 242 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 HDHD2Q9H0R4 259 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 SMURF1Q9HCE7 757 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 FTSJ1Q9UET6 329 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 A4GNTQ9UNA3 340 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 GSTK1Q9Y2Q3 226 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 NAALAD2Q9Y3Q0 740 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 TRIOBPQ9H2D6 2365 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 NR4A2P43354 598 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 COPZ1P61923 177 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 DLX2Q07687 328 aaPredicted RBP9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 PCDH1Q08174 1060 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 ILKQ13418 452 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 GPR18Q14330 331 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 INSL4Q14641 139 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 ARL9Q6T311 187 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 Q6ZSR6 202 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 RNF44Q7L0R7 432 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 CPOQ8IVL8 374 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 TP53I13Q8NBR0 393 aaPredicted RBP9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 CREB3L4Q8TEY5 395 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 TBC1D20Q96BZ9 403 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 NEURL2Q9BR09 285 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 PRDM7Q9NQW5 492 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 QPCTLQ9NXS2 382 aa9.79□□□□□ -0.84
CPSF1P1-201ENST00000397477 HEATR5BQ9P2D3 2071 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 A0A0A6YYD5 115 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 C21orf58P58505 322 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 IL18Q14116 193 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC48A1Q6P1K1 146 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ZNF438Q7Z4V0 828 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 LYSMD2Q8IV50 215 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ZBTB8BQ8NAP8 495 aaPredicted RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 BBS1Q8NFJ9 593 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 UFD1Q92890 307 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC35A4Q96G79 324 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC41A3Q96GZ6 507 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 MROQ9BYG7 248 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 TCEAL2Q9H3H9 227 aaPredicted RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ATP13A2Q9NQ11 1180 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 OSGIN1Q9UJX0 560 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 WBP11Q9Y2W2 641 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 CLCA3PQ9Y6N3 262 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 CXorf51AA0A1B0GTR3 108 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SH3D21A4FU49 640 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 URADA6NGE7 173 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ALAS2P22557 587 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SOX18P35713 384 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 RPL4P36578 427 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 EIF2DP41214 584 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 RPS25P62851 125 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC3A1Q07837 685 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SSX1Q16384 188 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 TRIQKQ629K1 86 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 NATD1Q8N6N6 113 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 C19orf18Q8NEA5 215 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 VMP1Q96GC9 406 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ABHD8Q96I13 439 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 PRRC1Q96M27 445 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ZNF582Q96NG8 517 aaPredicted RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 OPALINQ96PE5 141 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 MMP28Q9H239 520 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 RPS6KB2Q9UBS0 482 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 A0A1W2PQL4 384 aaPredicted RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SAGE2PA6NJ88 616 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 A8MVJ9 347 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 PEX12O00623 359 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 RDH16O75452 317 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 F3P13726 295 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 PRG2P13727 222 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ZNF10P21506 573 aaPredicted RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 TRHRP34981 398 aaPredicted RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 PPP1CAP62136 330 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SNRPNP63162 240 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 LRIT3Q3SXY7 679 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 KLHL22Q53GT1 634 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SYT14P1Q58G82 188 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLX4IPQ5VYV7 408 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 SLC36A4Q6YBV0 504 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 CCDC80Q76M96 950 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 RASGRP3Q8IV61 690 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 IL17RCQ8NAC3 791 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 OR52I1Q8NGK6 324 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 KCTD7Q96MP8 289 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 GFM1Q96RP9 751 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 TIMM29Q9BSF4 260 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 ACTRT3Q9BYD9 372 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 AICDAQ9GZX7 198 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 FBXO34Q9NWN3 711 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 KCMF1Q9P0J7 381 aa9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 MRPS2Q9Y399 296 aaKnown RBP9.78□□□□□ -0.84
CPSF1P1-201ENST00000397477 A0A0G2JPF8 293 aa9.77□□□□□ -0.85
CPSF1P1-201ENST00000397477 EPOPA6NHQ4 379 aa9.77□□□□□ -0.85
CPSF1P1-201ENST00000397477 HNRNPCL2B2RXH8 293 aa9.77□□□□□ -0.85
CPSF1P1-201ENST00000397477 HNRNPCL3B7ZW38 293 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms