RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MTHFD2LQ9H903 347 aaPredicted RBP25.45■■□□□ 1.66
CPNE1-203ENST00000397442 IL1RAPQ9NPH3 570 aa25.45■■□□□ 1.66
CPNE1-203ENST00000397442 SEC14L3Q9UDX4 400 aa25.45■■□□□ 1.66
CPNE1-203ENST00000397442 IGHV1-45A0A0A0MS14 117 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 A0A1W2PQ72 361 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 GUSBP08236 651 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 HOXB6P17509 224 aaKnown RBP25.44■■□□□ 1.66
CPNE1-203ENST00000397442 TNFRSF1BP20333 461 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 VLDLRP98155 873 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 DNASE1L3Q13609 305 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 GLIPR1L2Q4G1C9 344 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 KIRREL2Q6UWL6 708 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 COMTD1Q86VU5 262 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 LCORQ96JN0 433 aaPredicted RBP25.44■■□□□ 1.66
CPNE1-203ENST00000397442 LMF1Q96S06 567 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 ZNF700Q9H0M5 742 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 POLE3Q9NRF9 147 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 CBLCQ9ULV8 474 aa25.44■■□□□ 1.66
CPNE1-203ENST00000397442 FRG2CA6NGY1 282 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 C21orf140B9A014 251 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 SOCS6O14544 535 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 KIAA0513O60268 411 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 IGHEP01854 428 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 COX6A1P12074 109 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 RBMS1P29558 406 aaKnown RBP25.43■■□□□ 1.66
CPNE1-203ENST00000397442 RPS15P62841 145 aaKnown RBP25.43■■□□□ 1.66
CPNE1-203ENST00000397442 RNF4P78317 190 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 SLC29A4Q7RTT9 530 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 TSEN54Q7Z6J9 526 aaKnown RBP25.43■■□□□ 1.66
CPNE1-203ENST00000397442 AMIGO2Q86SJ2 522 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 ZNF619Q8N2I2 560 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 BCORP1Q8N888 145 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 VMP1Q96GC9 406 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 GAL3ST4Q96RP7 486 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 SPATA5L1Q9BVQ7 753 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 GPR87Q9BY21 358 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 NRSN2Q9GZP1 204 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 STOML1Q9UBI4 398 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 KCNE5Q9UJ90 142 aa25.43■■□□□ 1.66
CPNE1-203ENST00000397442 CENPVL1A0A0U1RR11 272 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 LOC101059948A0A1B0GTJ6 334 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 EPPINO95925 133 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 FESP07332 822 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 PABPC4LP0CB38 370 aaKnown RBP25.42■■□□□ 1.66
CPNE1-203ENST00000397442 RPS4Y1P22090 263 aaKnown RBP25.42■■□□□ 1.66
CPNE1-203ENST00000397442 FASP25445 335 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 CD82P27701 267 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 DLSTP36957 453 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 DCAF7P61962 342 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 GPR68Q15743 365 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 IFI44LQ53G44 452 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 PPP1R32Q7Z5V6 425 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 ZDHHC21Q8IVQ6 265 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 OR11G2Q8NGC1 345 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 RASSF5Q8WWW0 418 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 IMMP1LQ96LU5 166 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 BAG5Q9UL15 447 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 OR10H1Q9Y4A9 318 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 DCDC2BA2VCK2 349 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 AGAP5A6NIR3 686 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 CASQ2O14958 399 aaPredicted RBP25.42■■□□□ 1.66
CPNE1-203ENST00000397442 ALPPP05187 535 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 FCGR1AP12314 374 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 GCKP35557 465 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 PTDSS1P48651 473 aaKnown RBP25.42■■□□□ 1.66
CPNE1-203ENST00000397442 CAMK2BQ13554 666 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 PUM1Q14671 1186 aaKnown RBP eCLIP25.42■■□□□ 1.66
CPNE1-203ENST00000397442 ATP6AP1Q15904 470 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 DTX1Q86Y01 620 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 VRK2Q86Y07 508 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 C17orf47Q8NEP4 570 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 NKD1Q969G9 470 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 SEMA6AQ9H2E6 1030 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 YY1AP1Q9H869 796 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 ABCG2Q9UNQ0 655 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 CHST2Q9Y4C5 530 aa25.42■■□□□ 1.66
CPNE1-203ENST00000397442 OR1E2P47887 323 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 SSPNQ14714 243 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 MAPK14Q16539 360 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 HSDL2Q6YN16 418 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 PIWIL3Q7Z3Z3 882 aaKnown RBP25.41■■□□□ 1.66
CPNE1-203ENST00000397442 SPPL2AQ8TCT8 520 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 PMM1Q92871 262 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 FAM117AQ9C073 453 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 SH3GLB1Q9Y371 365 aa25.41■■□□□ 1.66
CPNE1-203ENST00000397442 NINQ8N4C6 2090 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 NPIPA5A0A0B4J1W7 369 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 NPIPA7E9PJI5 369 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 hCG_2039718K7EN88 272 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 PEX12O00623 359 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 TO15178 435 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 DXOO77932 396 aaKnown RBP25.4■■□□□ 1.66
CPNE1-203ENST00000397442 FABP3P05413 133 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 NPIPA8P0DM63 369 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 RFX3P48380 749 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.4■■□□□ 1.66
CPNE1-203ENST00000397442 HLA-DQA1Q5Y7H0 255 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 OR52P1PQ8NH57 321 aa25.4■■□□□ 1.66
CPNE1-203ENST00000397442 GEMIN6Q8WXD5 167 aaKnown RBP25.4■■□□□ 1.66
CPNE1-203ENST00000397442 WFDC6Q9BQY6 131 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms