RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 NUDT2P50583 147 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 PIGGQ5H8A4 983 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 SPANXN4Q5MJ08 99 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 NDUFAF5Q5TEU4 345 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 ANXA8L1Q5VT79 327 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 PRAMEF20Q5VT98 475 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 REP15Q6BDI9 236 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
NEDD8-202ENST00000396828 MSANTD1Q6ZTZ1 278 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 CAMKMTQ7Z624 323 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 SLC22A16Q86VW1 577 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 FAM109AQ8N4B1 249 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 OR8J2Q8NGG1 315 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 OR10Q1Q8NGQ4 319 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 VPS33AQ96AX1 596 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 RCN3Q96D15 328 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 SENP5Q96HI0 755 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-202ENST00000396828 FAM173AQ9BQD7 235 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 DUSP26Q9BV47 211 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 BHLHE41Q9C0J9 482 aaPredicted RBP9.49□□□□□ -0.89
NEDD8-202ENST00000396828 C1orf21Q9H246 121 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 IL1RL2Q9HB29 575 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 SACM1LQ9NTJ5 587 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 GID8Q9NWU2 228 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 FAM120CQ9NX05 1096 aaKnown RBP9.49□□□□□ -0.89
NEDD8-202ENST00000396828 EHD3Q9NZN3 535 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 SH3BP4Q9P0V3 963 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 ATP6V1HQ9UI12 483 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 PSME2Q9UL46 239 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 ASB4Q9Y574 426 aa9.49□□□□□ -0.89
NEDD8-202ENST00000396828 KIAA1549Q9HCM3 1950 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 A0A1W2PR48 441 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 A0A1W2PS29 197 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ACOT7O00154 380 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 AQP7O14520 342 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 GYG2O15488 501 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 PROM1O43490 865 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 TBX19O60806 448 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 NPPAP01160 153 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 CLPSP04118 112 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 NR2F6P10588 404 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 DNAJA1P31689 397 aaKnown RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 STT3AP46977 705 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ZFP36L2P47974 494 aaKnown RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 DGKQP52824 942 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ART1P52961 327 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 HNRNPH2P55795 449 aaKnown RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 WNT3P56703 355 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 IGLV3-21P80748 117 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 TNFRSF17Q02223 184 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 PDE7AQ13946 482 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 SERTAD2Q14140 314 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 HYAL4Q2M3T9 481 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ZNF791Q3KP31 576 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 DNAL1Q4LDG9 190 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 C16orf89Q6UX73 402 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 B3GNT6Q6ZMB0 384 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 SEM1Q6ZVN7 128 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 TMEM200AQ86VY9 491 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 GOLM1Q8NBJ4 401 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 OR7A2PQ8NGA2 310 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 OR8K3Q8NH51 312 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ROPN1LQ96C74 230 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 COQ8BQ96D53 544 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ZNF764Q96H86 408 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ITCHQ96J02 903 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ZNF559Q9BR84 538 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 BTBD10Q9BSF8 475 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 GIMAP4Q9NUV9 329 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 TEX10Q9NXF1 929 aaPredicted RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ALKBH4Q9NXW9 302 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 PCDHGB4Q9UN71 923 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 L3MBTL1Q9Y468 752 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 PCDHA9Q9Y5H5 950 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.48□□□□□ -0.89
NEDD8-202ENST00000396828 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
NEDD8-202ENST00000396828 PRSS51A0A1B0GVH4 220 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 OR14I1A6ND48 311 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 LRRC3CA6NJW4 275 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 GLOD5A6NK44 160 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 FBP2O00757 339 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 BCKDKO14874 412 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 KCNH1O95259 989 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 ANP32DO95626 131 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 AIFM1O95831 613 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 P04436 131 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 LAMP1P11279 417 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 CD1EP15812 388 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 MAN2A2P49641 1150 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 IST1P53990 364 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 FOLH1Q04609 750 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 MYBPHQ13203 477 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 NFYCQ13952 458 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 SLC10A1Q14973 349 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 MPEG1Q2M385 716 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 C6orf10Q5SRN2 563 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 OR4F3Q6IEY1 312 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 ANKRD26P1Q6NSI1 321 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 SLC2A7Q6PXP3 512 aa9.47□□□□□ -0.89
NEDD8-202ENST00000396828 OPN5Q6U736 354 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms