RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 KXD1Q9BQD3 176 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 DUSP26Q9BV47 211 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SORBS1Q9BX66 1292 aaKnown RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 JAM3Q9BX67 310 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 BARHL1Q9BZE3 327 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 C11orf54Q9H0W9 315 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 SPNS1Q9H2V7 528 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 IKZF5Q9H5V7 419 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 KCNK12Q9HB15 430 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 SLC6A20Q9NP91 592 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 ACTR10Q9NZ32 417 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.04□□□□□ -1.6
VPS41-203ENST00000395969 PCDHGA6Q9Y5G7 932 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 U3KQV3 271 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 DNAH12Q6ZR08 3092 aa5.04□□□□□ -1.6
VPS41-203ENST00000395969 CHD9Q3L8U1 2897 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 A0A1W2PQU0 124 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 MAGEB17A8MXT2 336 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TEX46H3BTG2 121 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 FPGTO14772 594 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GSTA4O15217 222 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 YY2O15391 372 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 FAM157BP0CG42 384 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GDF5P43026 501 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CBX5P45973 191 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 BDKRB1P46663 353 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TPMTP51580 245 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 OLR1P78380 273 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KCNJ10P78508 379 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 NAE1Q13564 534 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TDGQ13569 410 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 NFE2L1Q14494 772 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GPR19Q15760 415 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CCSMST1Q4G0I0 132 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 OR4F3Q6IEY1 312 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 MZT2AQ6P582 158 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TEX261Q6UWH6 196 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KIAA1324Q6UXG2 1013 aaKnown RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 PAMR1Q6UXH9 720 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KANSL1Q7Z3B3 1105 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TSEN54Q7Z6J9 526 aaKnown RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 C17orf64Q86WR6 236 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KIF18BQ86Y91 864 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CFAP206Q8IYR0 622 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TBC1D19Q8N5T2 526 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 NLGN4YQ8NFZ3 816 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 OR2L5Q8NG80 312 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 OR10A6Q8NH74 314 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 FGF11Q92914 225 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 FAM162AQ96A26 154 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 NTNG2Q96CW9 530 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 MS4A6EQ96DS6 147 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 COL21A1Q96P44 957 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CHCHD6Q9BRQ6 235 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TAPBPLQ9BX59 468 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 DUSP15Q9H1R2 295 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 SAV1Q9H4B6 383 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 MS4A12Q9NXJ0 267 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KCMF1Q9P0J7 381 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 FAM8A1Q9UBU6 413 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CD84Q9UIB8 345 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 SH2B3Q9UQQ2 575 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GPR52Q9Y2T5 361 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 U3KQ87 197 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 IQCMA0A1B0GVH7 501 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 A0A1W2PPC4 97 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CASC3O15234 703 aaKnown RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 PLA2G10O15496 165 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 PCDH7O60245 1069 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ZNF682O95780 498 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 PTHP01270 115 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 HLA-DQB1P01920 261 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CSF3P09919 207 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 SLC35G4P0C7Q5 338 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 F3P13726 295 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 HLA-EP13747 358 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 HOXB2P14652 356 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TNNI3P19429 210 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 FPR1P21462 350 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ITPKAP23677 461 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 TACR1P25103 407 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CRISP3P54108 245 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 RPP38P78345 283 aaKnown RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 NPRL3Q12980 569 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 BTN1A1Q13410 526 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 SLBPQ14493 270 aaKnown RBP eCLIP5.03□□□□□ -1.6
VPS41-203ENST00000395969 TATDN3Q17R31 274 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.03□□□□□ -1.6
VPS41-203ENST00000395969 COX20Q5RI15 118 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 CPTPQ5TA50 214 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 GARNL3Q5VVW2 1013 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 OR2T5Q6IEZ7 315 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ZNF770Q6IQ21 691 aaPredicted RBP5.03□□□□□ -1.6
VPS41-203ENST00000395969 ABHD17CQ6PCB6 329 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 SLC36A4Q6YBV0 504 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ZNF367Q7RTV3 350 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 NUDT13Q86X67 352 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 KMT5CQ86Y97 462 aa5.03□□□□□ -1.6
VPS41-203ENST00000395969 ZDHHC21Q8IVQ6 265 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms