RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
CXCL12-205ENST00000395794 KCNN3Q9UGI6 736 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 BAIAP2L1Q9UHR4 511 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 ABCG2Q9UNQ0 655 aa12.51□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF407Q9C0G0 2248 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 TMEM233B4DJY2 109 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 CTIFO43310 598 aaKnown RBP12.5□□□□□ -0.41
CXCL12-205ENST00000395794 SCO2O43819 266 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 TBX19O60806 448 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 IL33O95760 270 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 CPN1P15169 458 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 DPP4P27487 766 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 UQCRC1P31930 480 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-205ENST00000395794 GABRA3P34903 492 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 DGKQP52824 942 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 SRYQ05066 204 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 ATP6AP1LQ52LC2 224 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 ZCCHC23Q6ZST2 131 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 SEM1Q6ZVN7 128 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 CHMP1BQ7LBR1 199 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 NUDCD3Q8IVD9 361 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 MREGQ8N565 214 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 TNIP2Q8NFZ5 429 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 CLHC1Q8NHS4 586 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 ZPLD1Q8TCW7 415 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 GPR151Q8TDV0 419 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 CIDECQ96AQ7 238 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-205ENST00000395794 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 LMF2Q9BU23 707 aaKnown RBP12.5□□□□□ -0.41
CXCL12-205ENST00000395794 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 PTGES2Q9H7Z7 377 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 HHATLQ9HCP6 504 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 EQTNQ9NQ60 294 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 ACSS1Q9NUB1 689 aaPredicted RBP12.5□□□□□ -0.41
CXCL12-205ENST00000395794 FBXL2Q9UKC9 423 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 MRPS18CQ9Y3D5 142 aaKnown RBP12.5□□□□□ -0.41
CXCL12-205ENST00000395794 PCNX1Q96RV3 2341 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 MYO9AB2RTY4 2548 aa12.5□□□□□ -0.41
CXCL12-205ENST00000395794 APCP25054 2843 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-205ENST00000395794 PEX11AO75192 247 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 ZWINTO95229 277 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 PSMG1O95456 288 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 TUBBP07437 444 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 BPGMP07738 259 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 BCKDHAP12694 445 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 OPRM1P35372 400 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 ASCL1P50553 236 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 DSCR4P56555 118 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-205ENST00000395794 WNT3P56703 355 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 UGT3A2Q3SY77 523 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 DCST1Q5T197 706 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 ARSKQ6UWY0 536 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 CDRT4Q8N9R6 151 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 NUP43Q8NFH3 380 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 SLC9A6Q92581 669 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
CXCL12-205ENST00000395794 TM9SF2Q99805 663 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 PARD6BQ9BYG5 372 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 ATAD3AQ9NVI7 634 aa12.49□□□□□ -0.41
CXCL12-205ENST00000395794 FAM120CQ9NX05 1096 aaKnown RBP12.49□□□□□ -0.41
CXCL12-205ENST00000395794 RPH3AQ9Y2J0 694 aaPredicted RBP12.49□□□□□ -0.41
CXCL12-205ENST00000395794 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 SYT5O00445 386 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 EMC8O43402 210 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 TYROBPO43914 113 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 LYPLA1O75608 230 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 HSPA4LO95757 839 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 TCEA1P23193 301 aaKnown RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 CHMP24386 653 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 CTSSP25774 331 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 KIR2DL3P43628 341 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 GAS1P54826 345 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 GFRA1P56159 465 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 PRR5P85299 388 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 STX5Q13190 355 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 PDE7AQ13946 482 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 GANABQ14697 944 aaKnown RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 CROCCP2Q86T23 111 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 TMEM200AQ86VY9 491 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 NATD1Q8N6N6 113 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 FNDC5Q8NAU1 212 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 RMND5BQ96G75 393 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 MS4A4EQ96PG1 132 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 TUBA1CQ9BQE3 449 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 ACBD3Q9H3P7 528 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 DSN1Q9H410 356 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 EIF3LQ9Y262 564 aaKnown RBP12.48□□□□□ -0.41
CXCL12-205ENST00000395794 CREBBPQ92793 2442 aa12.48□□□□□ -0.41
CXCL12-205ENST00000395794 NINQ8N4C6 2090 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 PHF3Q92576 2039 aaKnown RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ADGRG4Q8IZF6 3080 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms