RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 FBXL3Q9UKT7 428 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SESN1Q9Y6P5 492 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 CDC123O75794 336 aaPredicted RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 OLFM2O95897 454 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 HOXB6P17509 224 aaKnown RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 DDCP20711 480 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ELAVL4P26378 380 aaKnown RBP12.44□□□□□ -0.42
NFKB1-202ENST00000394820 PNLIPRP1P54315 467 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 OR10A3P58181 314 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 CDC20Q12834 499 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 NDUFAF6Q330K2 333 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 TP53I3Q53FA7 332 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 FAM209AQ5JX71 171 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 C6orf132Q5T0Z8 1188 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 MPP7Q5T2T1 576 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 GRHL2Q6ISB3 625 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 TMED4Q7Z7H5 227 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 CCDC190Q86UF4 302 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 NUDT13Q86X67 352 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 FAM109AQ8N4B1 249 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 OR13C5Q8NGS8 318 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 RASSF5Q8WWW0 418 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 BADQ92934 168 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 RFKQ969G6 155 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF566Q969W8 418 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 NXPE3Q969Y0 559 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 DPAGT1Q9H3H5 408 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SLC28A3Q9HAS3 691 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 SLC23A1Q9UHI7 598 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 PCDHGB2Q9Y5G2 931 aa12.44□□□□□ -0.42
NFKB1-202ENST00000394820 THSD7BQ9C0I4 1608 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 M0R233 179 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 FAAHO00519 579 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 UCHL1P09936 223 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 ADH5P11766 374 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PTHLHP12272 177 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 RFX2P48378 723 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 CRYZQ08257 329 aaKnown RBP12.43□□□□□ -0.42
NFKB1-202ENST00000394820 EFR3AQ14156 821 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 GXYLT1Q4G148 440 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 NDUFAF5Q5TEU4 345 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 NXPE4Q6UWF7 544 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 GATSQ8NAP1 163 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 NKX3-1Q99801 234 aaPredicted RBP12.43□□□□□ -0.42
NFKB1-202ENST00000394820 DPH7Q9BTV6 452 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 SRRQ9GZT4 340 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 RPS6KB2Q9UBS0 482 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 GNG8Q9UK08 70 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 LIPCP11150 499 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PPP3R1P63098 170 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 SIM1P81133 766 aaPredicted RBP12.43□□□□□ -0.42
NFKB1-202ENST00000394820 SLC9A5Q14940 896 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 ZER1Q7Z7L7 766 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 GDPD1Q8N9F7 314 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 GALNT11Q8NCW6 608 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
NFKB1-202ENST00000394820 ZG16BQ96DA0 208 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 WFDC6Q9BQY6 131 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PLA2G12AQ9BZM1 189 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PADI2Q9Y2J8 665 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PCDHGB1Q9Y5G3 927 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 FAM86C2PA6NEL3 165 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 GABRPO00591 440 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 DVL2O14641 736 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 ALDOBP05062 364 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 FURINP09958 794 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 SYT14P1Q58G82 188 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 ALKAL2Q6UX46 152 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 L3MBTL4Q8NA19 623 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PROKR2Q8NFJ6 384 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 OR4E2Q8NGC2 313 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 OR4C6Q8NH72 309 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 WDR20Q8TBZ3 569 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
NFKB1-202ENST00000394820 TIFAQ96CG3 184 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 PDCD10Q9BUL8 212 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 MARK1Q9P0L2 795 aa12.43□□□□□ -0.42
NFKB1-202ENST00000394820 SH3D21A4FU49 640 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 TRIM64A6NGJ6 449 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 RNASET2O00584 256 aaKnown RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 MC3RP41968 323 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 MAGEA2P43356 314 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 HSF2Q03933 536 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 CHRNEQ04844 493 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 TRMT10AQ8TBZ6 339 aaKnown RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 ZMYND19Q96E35 227 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 ZNF582Q96NG8 517 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 BHLHE41Q9C0J9 482 aaPredicted RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 DPP7Q9UHL4 492 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 L7N2F9 121 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 CHST10O43529 356 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 TIMP1P01033 207 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 HPGDP15428 266 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 NPPBP16860 134 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 PUM1Q14671 1186 aaKnown RBP eCLIP12.42□□□□□ -0.42
NFKB1-202ENST00000394820 SLCO4C1Q6ZQN7 724 aa12.42□□□□□ -0.42
NFKB1-202ENST00000394820 PGBD3Q8N328 593 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms