RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SV2CQ496J9 727 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 FAM27D1Q5T7N8 215 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 ZNF248Q8NDW4 579 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 OR5T3Q8NGG3 340 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 OR6B3Q8NGW1 331 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 PANX1Q96RD7 426 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 EDEM2Q9BV94 578 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 TOLLIPQ9H0E2 274 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 OPN3Q9H1Y3 402 aaPredicted RBP11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 WDR13Q9H1Z4 485 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 SLC25A32Q9H2D1 315 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 CYSLTR2Q9NS75 346 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 VSX1Q9NZR4 365 aaPredicted RBP11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 METTL1Q9UBP6 276 aaKnown RBP11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 PPT2Q9UMR5 302 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 RASD1Q9Y272 281 aa11.8□□□□□ -0.52
SLC28A1-203ENST00000394573 A0A1B0GW55 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 HEPACAM2A8MVW5 462 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 GUCA1CO95843 209 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 NR2F6P10588 404 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 LUMP51884 338 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 WNT4P56705 351 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RAB12Q6IQ22 244 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 IKBIPQ70UQ0 350 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 MON1AQ86VX9 555 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ISOC2Q96AB3 205 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 F2RL3Q96RI0 385 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 TPT1P8Q9HAU6 139 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 MEPEQ9NQ76 525 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RBM22Q9NW64 420 aaKnown RBP eCLIP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RASL12Q9NYN1 266 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 HACL1Q9UJ83 578 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 STRCQ7RTU9 1775 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 OR7A17O14581 309 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 FGF19O95750 216 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ACTL6AO96019 429 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 THP07101 528 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ATXN1LP0C7T5 689 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 PDHA2P29803 388 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ADRA1AP35348 466 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 SORDQ00796 357 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 MBOAT1Q6ZNC8 495 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DPPA4Q7L190 304 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 LRRTM1Q86UE6 522 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RGL4Q8IZJ4 473 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 NAGSQ8N159 534 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 OR4C15Q8NGM1 316 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 LMAN2LQ9H0V9 348 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 TMPRSS5Q9H3S3 457 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 PRDM13Q9H4Q3 707 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 SUV39H2Q9H5I1 410 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 CRLF2Q9HC73 371 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 NPDC1Q9NQX5 325 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 GFOD1Q9NXC2 390 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ANKRD61A6NGH8 418 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 TMEM229AB2RXF0 380 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 LATS1O95835 1130 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 C6orf47O95873 294 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 IGHA2P01877 340 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 CD2P06729 351 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 GIPP09681 153 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 EPXP11678 715 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ETFAP13804 333 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 DDTP30046 118 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 CCR1P32246 355 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 H2BFSP57053 126 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RAP2BP61225 183 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 SURF2Q15527 256 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 OR8G1Q15617 311 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 KRBOX4Q5JUW0 171 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 CASP12Q6UXS9 341 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RTL10Q7L3V2 364 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 GOLGA7Q7Z5G4 137 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 LSRQ86X29 649 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 SLITRK4Q8IW52 837 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 PRR18Q8N4B5 295 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 RTL3Q8N8U3 475 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 OR51Q1Q8NH59 317 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ACOT12Q8WYK0 555 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ZFP42Q96MM3 310 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 FCRL5Q96RD9 977 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ZNF382Q96SR6 550 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 IPPKQ9H8X2 491 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 NMNAT1Q9HAN9 279 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 PPP4R1LQ9P1A2 415 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 ARL5AQ9Y689 179 aa11.79□□□□□ -0.52
SLC28A1-203ENST00000394573 SBF2Q86WG5 1849 aa11.78□□□□□ -0.52
SLC28A1-203ENST00000394573 DOCK5Q9H7D0 1870 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms