RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 RLIMQ9NVW2 624 aa9.99□□□□□ -0.81
PDGFD-202ENST00000393158 PSME2Q9UL46 239 aa9.99□□□□□ -0.81
PDGFD-202ENST00000393158 A4GNTQ9UNA3 340 aa9.99□□□□□ -0.81
PDGFD-202ENST00000393158 PCDHGA8Q9Y5G5 932 aa9.99□□□□□ -0.81
PDGFD-202ENST00000393158 NVLO15381 856 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 MAN1A2O60476 641 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 DIRAS1O95057 198 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PABPC4LP0CB38 370 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 COX6A1P12074 109 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 GSTT1P30711 240 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 TRHRP34981 398 aaPredicted RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 AQP4P55087 323 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PRR5P85299 388 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ELAVL1Q15717 326 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 AASDHQ4L235 1098 aaPredicted RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ARHGAP40Q5TG30 622 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ZCCHC12Q6PEW1 402 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 RAB11FIP2Q7L804 512 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 VRK2Q86Y07 508 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ARMC10Q8N2F6 343 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 OR1N1Q8NGS0 311 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ARSGQ96EG1 525 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 SLC47A1Q96FL8 570 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ARHGDIGQ99819 225 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 HS3ST3B1Q9Y662 390 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 KALRNO60229 2985 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 AGAP5A6NIR3 686 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PDLIM1O00151 329 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 STK17BO94768 372 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 CELA2AP08217 269 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 MST1P26927 711 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PIGAP37287 484 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 AP2B1P63010 937 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PPP2R2BQ00005 443 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 TMEM53Q6P2H8 277 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 C16orf47Q6ZP98 133 aaPredicted RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 FAM71CQ8NEG0 241 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ULBP3Q9BZM4 244 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 SYNDIG1Q9H7V2 258 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ADAP2Q9NPF8 381 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 GIMAP4Q9NUV9 329 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 ANAPC2Q9UJX6 822 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 CLCA2Q9UQC9 943 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 IGHV1-45A0A0A0MS14 117 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PEX1O43933 1283 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 LGI1O95970 557 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 NT5EP21589 574 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 CSTF2P33240 577 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 KHKP50053 298 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 PPP1R8Q12972 351 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 IL10RAQ13651 578 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 NRF1Q16656 503 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 NHSL2Q5HYW2 709 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 DCST2Q5T1A1 773 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 THOC7Q6I9Y2 204 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 SLC7A5P1Q8MH63 180 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 C8orf44Q96CB5 159 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 NMD3Q96D46 503 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 FANCEQ9HB96 536 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 DDX18Q9NVP1 670 aaKnown RBP9.98□□□□□ -0.81
PDGFD-202ENST00000393158 P2RX2Q9UBL9 471 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 KNTC1P50748 2209 aa9.98□□□□□ -0.81
PDGFD-202ENST00000393158 TO15178 435 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 GPC1P35052 558 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 HMGA2P52926 109 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 GK3PQ14409 553 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NCF4Q15080 339 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 TBCELQ5QJ74 424 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 CDRT4Q8N9R6 151 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 C7orf57Q8NEG2 295 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 ELP5Q8TE02 316 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 PRR14Q9BWN1 585 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NXF5Q9H1B4 397 aaKnown RBP9.97□□□□□ -0.81
PDGFD-202ENST00000393158 SLC39A1Q9NY26 324 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 OAZ3Q9UMX2 235 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 AHCTF1Q8WYP5 2266 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 TP53P04637 393 aaPredicted RBP9.97□□□□□ -0.81
PDGFD-202ENST00000393158 HTR2AP28223 471 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 ARL4DP49703 201 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 E2F1Q01094 437 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 SERTAD2Q14140 314 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NSDHLQ15738 373 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 KIRREL2Q6UWL6 708 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 ZNF836Q6ZNA1 936 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 METTL25Q8N6Q8 603 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 XAGE5Q8WWM1 108 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 ZNF597Q96LX8 424 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 ZNF578Q96N58 590 aaPredicted RBP9.97□□□□□ -0.81
PDGFD-202ENST00000393158 ACER3Q9NUN7 267 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NDOR1Q9UHB4 597 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 MKLN1Q9UL63 735 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NPIPA5A0A0B4J1W7 369 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 SAGE2PA6NJ88 616 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NPIPA7E9PJI5 369 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 TSPAN2O60636 221 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 NPIPA8P0DM63 369 aa9.97□□□□□ -0.81
PDGFD-202ENST00000393158 DDX5P17844 614 aaKnown RBP9.97□□□□□ -0.81
PDGFD-202ENST00000393158 CSRP1P21291 193 aaKnown RBP9.97□□□□□ -0.81
PDGFD-202ENST00000393158 RPS18P62269 152 aaKnown RBP9.97□□□□□ -0.81
PDGFD-202ENST00000393158 TARDBPQ13148 414 aaKnown RBP eCLIP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms