RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 GRAMD2AQ8IUY3 354 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 POU5F2Q8N7G0 328 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 TNIP2Q8NFZ5 429 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 CDS1Q92903 461 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 PROK2Q9HC23 129 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 EXOSC3Q9NQT5 275 aaKnown RBP12.2□□□□□ -0.46
USP44-202ENST00000393091 MAN1A2O60476 641 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 ZIC2O95409 532 aaPredicted RBP12.2□□□□□ -0.46
USP44-202ENST00000393091 EFNA1P20827 205 aaPredicted RBP12.2□□□□□ -0.46
USP44-202ENST00000393091 SELPLGQ14242 412 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 DNAL1Q4LDG9 190 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP44-202ENST00000393091 GCNT6Q5T4J0 391 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 ABHD17BQ5VST6 288 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 RNF220Q5VTB9 566 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 FRRS1Q6ZNA5 592 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 BEST3Q8N1M1 668 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 OR5AK3PQ8NH89 298 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 SLC38A1Q9H2H9 487 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 OLAHQ9NV23 265 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 GPC6Q9Y625 555 aaPredicted RBP12.2□□□□□ -0.46
USP44-202ENST00000393091 EML6Q6ZMW3 1958 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 LOC100653049A0A140TA62 436 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 TRIM3O75382 744 aaPredicted RBP12.2□□□□□ -0.46
USP44-202ENST00000393091 STX11O75558 287 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 KRT34O76011 436 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 C1QCP02747 245 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 C8BP07358 591 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 GABRA3P34903 492 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 SOAT1P35610 550 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 TNFSF10P50591 281 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 CORO7P57737 925 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 CBX1P83916 185 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 DHRS4L2Q6PKH6 230 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 C10orf111Q8N326 155 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 POGLUT1Q8NBL1 392 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 LRMDAQ9H2I8 198 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 MTHFD2LQ9H903 347 aaPredicted RBP12.2□□□□□ -0.46
USP44-202ENST00000393091 KCNE3Q9Y6H6 103 aa12.2□□□□□ -0.46
USP44-202ENST00000393091 ALG1L2C9J202 215 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 NME4O00746 187 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 DPM1O60762 260 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 SOX3P41225 446 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 NR0B1P51843 470 aaKnown RBP12.19□□□□□ -0.46
USP44-202ENST00000393091 ART3Q13508 389 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 C6orf10Q5SRN2 563 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 ZNF619Q8N2I2 560 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 SLC38A5Q8WUX1 472 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 BARD1Q99728 777 aaKnown RBP12.19□□□□□ -0.46
USP44-202ENST00000393091 TAS2R1Q9NYW7 299 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 STMN3Q9NZ72 180 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 GXYLT2A0PJZ3 443 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 CBX6O95503 412 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 GSNP06396 782 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 CNR1P21554 472 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 PTGER1P34995 402 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 CD96P40200 585 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 NUDT2P50583 147 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 RASSF2P50749 326 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 ATAD3BQ5T9A4 648 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 RINLQ6ZS11 566 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 RBM15BQ8NDT2 890 aaKnown RBP12.19□□□□□ -0.46
USP44-202ENST00000393091 HIPK4Q8NE63 616 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 ASB15Q8WXK1 588 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 TMCO6Q96DC7 493 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 RNF145Q96MT1 663 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 UTP23Q9BRU9 249 aaKnown RBP12.19□□□□□ -0.46
USP44-202ENST00000393091 BTBD10Q9BSF8 475 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 GORASP2Q9H8Y8 452 aa12.19□□□□□ -0.46
USP44-202ENST00000393091 TP53I11O14683 189 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 GCM2O75603 506 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 OR6B1O95007 311 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 SNX4O95219 450 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 WDPCPO95876 746 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 OR12D1P0DN82 309 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 CYP4B1P13584 511 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 ETFAP13804 333 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 CASRP41180 1078 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 CYB561P49447 251 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 ATP12AP54707 1039 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 VMACQ2NL98 169 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 SAMD4BQ5PRF9 694 aaKnown RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 COX18Q8N8Q8 333 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 TMBIM1Q969X1 311 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 UBQLN4Q9NRR5 601 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 MED13Q9UHV7 2174 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 GLSO94925 669 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 PLCXD2Q0VAA5 305 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 FGFBP1Q14512 234 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 ST3GAL2Q16842 350 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 REEP3Q6NUK4 255 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 C11orf65Q8NCR3 313 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 ARSGQ96EG1 525 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 UBL7Q96S82 380 aaPredicted RBP12.18□□□□□ -0.46
USP44-202ENST00000393091 QPCTLQ9NXS2 382 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 IFT52Q9Y366 437 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 ASPMQ8IZT6 3477 aa12.18□□□□□ -0.46
USP44-202ENST00000393091 AGAP5A6NIR3 686 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms